Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq313 172 6e-38
seq415 138 1e-27
seq213 127 2e-24
seq2834 116 4e-21
>seq313
Length=54589
Score = 172 bits (190), Expect = 6e-38
Identities = 576/883 (65%), Gaps = 29/883 (3%)
Strand=Plus/Plus
Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600
||||||||||| ||||| |||||||| || || ||| ||| ||| |||||||| ||
Sbjct 33965 CCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGGACTGCCCTGGAAGGTCTCGTAGGG 34024
Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660
|| | |||||| || ||| ||| | | | || || || || || ||| ||
Sbjct 34025 ACCATGGAGCTTGGCAAGATCAATCGAGGCAGTGATGGATGCATGGTATATAGTCTCGAA 34084
Query 80661 GACGCCCTTGTTCACACCGCGCG-CCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719
| |||| | | || | ||| ||| ||||| | || || | || ||
Sbjct 34085 AATCTGGATGTTGAG-CTGCTTGGCCTCGGGGGAATCGAAAGGCATGCGAAGAGCCAGGA 34143
Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCT 80779
| | || || || || | || || | ||||| |||||||| ||| |||| | || |
Sbjct 34144 AGGCATCGGCAAGACCGTTGACACCCACTGCGATGGGGCGGTGACGCATGTT-GCTCTTT 34202
Query 80780 C-GGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838
| |||||| || | ||||| ||| | ||||||| ||||| ||| |
Sbjct 34203 CTGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGAGC 34262
Query 80839 ACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTG---GTTCCC--CTTC-ACAAAT 80892
||| | ||||| || ||||| |||| |||||| | |||| | | || || ||
Sbjct 34263 ACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCGTTCTCAACGTCGACGAAG 34322
Query 80893 GCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCG 80952
| ||| || ||| || |||| ||||| || || ||||| |||| | || |||||
Sbjct 34323 GTCGGGAGAGCCAGCGAGGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCG 34382
Query 80953 ACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTG 81012
||||| || ||| | || || || ||||| ||||| || ||||| ||||
Sbjct 34383 ACGATCTCGCAGCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTG 34442
Query 81013 GCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGG 81072
|||||| |||||||| |||| | ||| |||| ||||||||||| | || |||
Sbjct 34443 CGGTTGCAGTGATCCTTGTACAGCATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGA 34502
Query 81073 ATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATAC 81132
||||||| ||| | || | || |||| || ||| || || | | |||
Sbjct 34503 ATGGCGTACCAGAGCTTCTGAGCGCGGACCGTCTCACGGCCGCGACCCTCCTTCTCGTAC 34562
Query 81133 TTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTA 81192
| ||||| | ||||||| | | || | || || | || | |||||||||||
Sbjct 34563 TGCTCGTAAAGAGCCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTG 34622
Query 81193 GGGCACATCAGGTGCCAGTCGGTGTCGTT---CTCTACAGCCTTCATGAAAGCGTCAGGG 81249
|||||||| ||| ||| |||| |||| ||| ||| |||||||| |||||
Sbjct 34623 GGGCACATGAGGGTCCA---GGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGA 34679
Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGC 81307
|||||||| ||| |||||||||||| ||| || | ||||| | || ||||| ||
Sbjct 34680 ATCCAGAGAGCGTAGAACAGGTCGCG--AGCCCGGACTTCCTCCTTGCCGTGGTTCTTGC 34737
Query 81308 GCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC 81366
| | ||||| || | || ||| || ||||||||||| || || | ||||| | ||
Sbjct 34738 GAAGATCGAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCAC 34797
Query 81367 CC-----CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGT 81404
|| |||| ||||||||||| ||||| || |||||
Sbjct 34798 CCGGACGCTTG---TTGCCACCCTGGTCAACGTAGCGTGCAGT 34837
>seq415
Length=72904
Score = 138 bits (152), Expect = 1e-27
Identities = 145/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || ||||||||||| || || | || || ||||||
Sbjct 7596 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGTCATCG 7537
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| ||||| | || || || ||||| ||||| || || || || |||
Sbjct 7536 GACACGATCGACAATGTGAAGTCCAAGATCCAAGACAAAGAGGGCATCCCCCCGGATCAG 7477
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||||||||| || ||||| | |||||||| | ||||| ||
Sbjct 7476 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAAC 7417
Query 27586 GTCCAAAAGGA 27596
|||| |||||
Sbjct 7416 ATCCAGAAGGA 7406
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| || || |||||||| ||||| || | ||| | ||| | ||| |
Sbjct 7800 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGACACCATCGACAATGTCAAGTCG 7741
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||||||||| || || || || ||||||||||| | || || ||||| |||
Sbjct 7740 AAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 7681
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || || |||| |||||||| | ||||| || |||| ||||| || ||||| ||
Sbjct 7680 CAGCTTGAAGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAC 7621
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || || || |||||
Sbjct 7620 CTCGTCCTCCGCCTCCGTGGTGG 7598
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || |||||||| ||||| || | ||| | || | |||
Sbjct 8083 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACGTCAAGAGC 8024
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||| ||||| || |||||||| || |||||||| | || || ||||| |||
Sbjct 8023 AAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCTGGCAAG 7964
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || || |||| || ||||| | ||||| || | || ||||| ||||| ||||||
Sbjct 7963 CAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCTTCAT 7904
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || || ||||||||
Sbjct 7903 CTCGTCCTCCGCCTCCGCGGTGG 7881
>seq213
Length=68309
Score = 127 bits (140), Expect = 2e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467
||| | ||| |||||||| || || |||||||| || || || ||||| ||||| ||
Sbjct 7555 GCATAGCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGA 7614
Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527
| ||| | ||| | ||| || || |||||||||||||| ||||| || ||||||||
Sbjct 7615 CACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCA 7674
Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587
||| || || || || || ||||| |||||||||| || ||||| | ||||| || |
Sbjct 7675 GCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACAT 7734
Query 27588 CCAAAAGG 27595
||| ||||
Sbjct 7735 CCAGAAGG 7742
>seq2834
Length=116819
Score = 116 bits (128), Expect = 4e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| || || || |||||||||||||| || || ||||| ||||| ||||||
Sbjct 83492 GACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 83433
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || ||||| | ||||| || |||| ||||| ||||| ||||| || || ||
Sbjct 83432 GATGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTG 83373
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 83372 CGCCTGCGTGGTGG 83359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570283509864640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |