Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq622 95.1 1e-14
>seq622
Length=30049
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/223 (70%), Gaps = 3/223 (1%)
Strand=Plus/Plus
Query 29840 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAG 29899
|| ||| ||| ||||| ||||| ||||| ||| || | || |||| || ||||||
Sbjct 5577 GGGAAGTCTCTTGGCTCTCTCTCCAGCTGCACCTTTAGTGCGTCGACGTGGTCGAGGTAG 5636
Query 29900 ACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29958
|| || || || |||| | |||| | ||| | | || || || | |||||| ||
Sbjct 5637 ACATGGGCATCGCCCATGGTGTGCGTCAACGTGCCAGGGGTC-AGATGGCAGACGTGCGC 5695
Query 29959 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 30018
|| ||||| ||||||||||| ||| || ||||| || || || ||||| ||||||||
Sbjct 5696 CAGCATGTGCGTGAGGAGAGCGTACGACGCAATGTTGAAAGGCACGCCGAGACCCATGTC 5755
Query 30019 CCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061
| |||| ||| || ||| | || |||| | ||| |||||
Sbjct 5756 GCAAGACCGCTGATAAAGCAGGCAGTGGAGCACCCCG-CGCTC 5797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406291721403024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |