Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq415 105 6e-18
>seq415
Length=72904
Score = 105 bits (116), Expect = 6e-18
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
||||||||| | || || ||||| || || |||||||| | || || | |||||
Sbjct 8083 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACGTCAAGAGC 8024
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || || || || |||||||| || || ||||| ||||| || || | ||| |||||
Sbjct 8023 AAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCTGGCAAG 7964
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| | ||||| | ||| | ||||| ||||||||||| |||||||| ||| | |||
Sbjct 7963 CAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCTTCAT 7904
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| || | || | || ||||| ||
Sbjct 7903 CTCGTCCTCCGCCTCCGCGGTGGTAT 7878
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || ||||||||| | || || | ||||| || | ||
Sbjct 7596 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGTCATCG 7537
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || || || || ||||||||||| ||||| || || |||||
Sbjct 7536 GACACGATCGACAATGTGAAGTCCAAGATCCAAGACAAAGAGGGCATCCCCCCGGATCAG 7477
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || || || |||| ||| | ||| | || || ||||||
Sbjct 7476 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAAC 7417
Query 27168 ATTCAAAAGGAGT 27180
|| || |||||||
Sbjct 7416 ATCCAGAAGGAGT 7404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434897893597440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |