Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq622 87.8 2e-12 >seq622 Length=30049 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 6500 AGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTC 6559 |||| ||||| || ||||||| | |||||| | | || |||| ||||| Sbjct 5571 AGCTCCGGGAAGTCTCTTGGCTCTCTCTCCAGCTGCACCTTTAGTGCGTCGACGTGGTCG 5630 Query 6560 AGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCA-ACCCCACGAC 6618 ||||||| ||| ||||| |||| || ||| || | ||||| || | || ||| Sbjct 5631 AGGTAGACATGGGCATCGCCCATGGTGTGCGTCAACGTGCCAGGGGTCAGATGGCA-GAC 5689 Query 6619 ATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCC 6678 || || | ||||| |||||| |||||||| ||||||||||| ||||| || | || Sbjct 5690 GTGCGCCAGCATGTGCGTGAGGAGAGCGTACGACGCAATGTTGAAAGGCACGCCGAGACC 5749 Query 6679 CATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCC 6720 |||||| | || || ||||| ||| ||||| ||| |||| Sbjct 5750 CATGTCGCAAGACCGCTGATAAAGCAGGCAGTGGAGCACCCC 5791 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 |||| ||| ||||| ||| ||||| || || | |||||||| | || ||||| ||| Sbjct 5791 GGGGTGCTCCACTGCCTGCTTTATCAGCGGTCTTGCGACATGGGTCTCGGCGTGCCTTTC 5732 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGT-TGGTTCC 34743 |||||||| |||||||| |||||| ||||| | || || ||| || | || || Sbjct 5731 AACATTGCGTCGTACGCTCTCCTCACGCACATGCTGGCGCACGTC-TGCCATCTGACCCC 5673 Query 34744 TGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCT 34803 ||| | || ||| || |||| ||||| ||| ||||||| ||||| |||| || Sbjct 5672 TGGCACGTTGACGCACACCATGGGCGATGCCCATGTCTACCTCGACCACGTCGACGCACT 5613 Query 34804 CCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCT 34845 | | |||||| | ||||||| || ||||| |||| Sbjct 5612 AAAGGTGCAGCTGGAGAGAGAGCCAAGAGACTTCCCGGAGCT 5571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448241264427840