Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq622 100 2e-16
>seq622
Length=30049
Score = 100 bits (110), Expect = 2e-16
Identities = 143/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 27106 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 27165
|| ||| ||| ||||| ||||| ||||| ||| || | || ||||| || ||||||
Sbjct 5577 GGGAAGTCTCTTGGCTCTCTCTCCAGCTGCACCTTTAGTGCGTCGACGTGGTCGAGGTAG 5636
Query 27166 ACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 27224
|| || || || |||| |||||| | ||| | | || || || | |||||| ||
Sbjct 5637 ACATGGGCATCGCCCATGGTGTGCGTCAACGTGCCAGGGGTC-AGATGGCAGACGTGCGC 5695
Query 27225 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 27284
|| ||||| ||||||||||| ||| || ||||| || || || ||||| ||||||||
Sbjct 5696 CAGCATGTGCGTGAGGAGAGCGTACGACGCAATGTTGAAAGGCACGCCGAGACCCATGTC 5755
Query 27285 CCCCGACCTCTGGTAGAGC 27303
| |||| ||| || |||
Sbjct 5756 GCAAGACCGCTGATAAAGC 5774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369490213292132
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |