Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq313 105 9e-18 >seq313 Length=54589 Score = 105 bits (116), Expect = 9e-18 Identities = 298/452 (66%), Gaps = 8/452 (2%) Strand=Plus/Plus Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 ||| | |||| || || || ||||| ||||||| ||| || ||||| || || ||| Sbjct 34568 GTAAAGAGCC--TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGG 34625 Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032 ||||| | | |||| || | | || || |||||||| ||||||||||| ||||| Sbjct 34626 CACATGAGGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAG 34685 Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092 ||||| || || || || | | ||| || || || ||||| ||||||| Sbjct 34686 AGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCG 34745 Query 78093 A-GAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCG 78151 | |||||| | | || | |||||||| || || || || || | | || || || Sbjct 34746 AGGAAACT-GAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACG 34804 Query 78152 TTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAAT 78211 || || || ||||| || | || | || ||||| || || || | | ||| ||||| Sbjct 34805 CTTGTTGCCACCCTGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAAT 34864 Query 78212 AATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACT 78271 | ||||| || ||||| || |||| ||| || || ||| | || || || | Sbjct 34865 CAAGCCGTTGCTAGTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGATG 34924 Query 78272 A--ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTA 78329 | || || | || || ||||| || |||| || || | ||||| || | || Sbjct 34925 AACATTGAGA--CCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTG 34982 Query 78330 TCGTAGATACCCTCTATACTGTCATCCATCAT 78361 |||||||| || || || || || ||| |||| Sbjct 34983 TCGTAGATGCCGTCGATGCTATCCTCCTTCAT 35014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694636046366080