Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq313 122 1e-22 >seq313 Length=54589 Score = 122 bits (134), Expect = 1e-22 Identities = 289/437 (66%), Gaps = 0/437 (0%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || || || ||||| ||||||| ||| || || || || || || ||||| | | | Sbjct 34578 TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTC 34637 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || | | || || |||||||| ||||||||||| ||||| ||||| || Sbjct 34638 CAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 34697 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 || || || | | ||| || || || ||||| |||||| ||||| | Sbjct 34698 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAG 34757 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | || | |||||||| || || || || || | ||||||| || || || || ||| Sbjct 34758 ACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 34817 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | || | |||||||| || || || | | ||| ||||| | |||||| Sbjct 34818 TGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTA 34877 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 || ||||| || |||| ||| || || ||| ||||| || | || | || || Sbjct 34878 GTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGATGAACATTGAGACCG 34937 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || ||||| || | || ||||| | || ||| || | ||||| |||||||| || Sbjct 34938 ATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTCG 34997 Query 76940 ATACTATCATCCATCAT 76956 || ||||| ||| |||| Sbjct 34998 ATGCTATCCTCCTTCAT 35014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712900785143040