Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq313 122 1e-22
>seq313
Length=54589
Score = 122 bits (134), Expect = 1e-22
Identities = 289/437 (66%), Gaps = 0/437 (0%)
Strand=Plus/Plus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
|| || || ||||| ||||||| ||| || || || || || || ||||| | | |
Sbjct 34578 TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTC 34637
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| || | | || || |||||||| ||||||||||| ||||| ||||| ||
Sbjct 34638 CAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 34697
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
|| || || | | ||| || || || ||||| |||||| ||||| |
Sbjct 34698 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAG 34757
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
| || | |||||||| || || || || || | ||||||| || || || || |||
Sbjct 34758 ACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 34817
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
|| || | || | |||||||| || || || | | ||| ||||| | ||||||
Sbjct 34818 TGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTA 34877
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
|| ||||| || |||| ||| || || ||| ||||| || | || | || ||
Sbjct 34878 GTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGATGAACATTGAGACCG 34937
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939
|| ||||| || | || ||||| | || ||| || | ||||| |||||||| ||
Sbjct 34938 ATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTCG 34997
Query 76940 ATACTATCATCCATCAT 76956
|| ||||| ||| ||||
Sbjct 34998 ATGCTATCCTCCTTCAT 35014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712900785143040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |