Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq664 105 8e-18 >seq664 Length=348155 Score = 105 bits (116), Expect = 8e-18 Identities = 289/441 (66%), Gaps = 4/441 (1%) Strand=Plus/Plus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 || ||||||||||| |||||| ||| || || || || | || ||||| | | | Sbjct 292976 TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTC 293035 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || |||| | || || |||||||| ||||||||||||||||| ||||| || Sbjct 293036 CAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 293095 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 || || | | | |||||| || || ||||| |||||| ||||| | Sbjct 293096 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCAAGGAAACTGAAG 293155 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 | || | ||||| || || | ||| |||| | | || || || ||||| || ||| Sbjct 293156 ACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 293215 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 || || | ||| | || ||||| || || || | | ||| ||||| | || ||| Sbjct 293216 TGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTA 293275 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGAC 54308 | || ||||| || | || ||||| ||| ||||||| || | |||| |||| Sbjct 293276 GTGCCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTG--AGAC 293333 Query 54309 CTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 54368 | || || || || | || ||||| | ||||| || | || || ||||| || | Sbjct 293334 CGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGT 293393 Query 54369 CTATACTATCATCCATCATGT 54389 | || ||||| ||| |||||| Sbjct 293394 CGATGCTATCCTCCTTCATGT 293414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593716449465120