Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq16 152 4e-32 seq235 89.7 4e-13 seq663 84.2 2e-11 >seq16 Length=352857 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| ||||||||| |||||||| |||||||| ||||||| Sbjct 17201 CCACCGCGCAGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 17142 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||||||||| || ||||| | || || | |||||||||| ||| Sbjct 17141 AGGGTACGGCCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGGG 17082 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | | ||| || || | ||| | Sbjct 17081 ATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCGACT 17022 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||||||||| | || ||||| || |||||||| Sbjct 17021 TCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 16975 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| | | Sbjct 16973 CCACCACGGAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 16914 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| ||||| || | || | | |||||||||| ||| Sbjct 16913 AGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 16854 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || || ||| Sbjct 16853 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 16794 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| ||||||||||| || Sbjct 16793 TCAAGGGTGATGGTCTTGCCAGT 16771 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||| |||||||| ||||| | | Sbjct 16690 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 16631 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || || ||||| ||||| || | || | | |||||| ||| || Sbjct 16630 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGAGGA 16571 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || |||||| || || | | ||| || || | ||| Sbjct 16570 ATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACC 16511 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| |||||||||||||| Sbjct 16510 TCAAGGGTGATGGTCTTGCCGGT 16488 >seq235 Length=704811 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | ||||||||||| || ||||| ||||||| Sbjct 89954 CCACCACGCAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 90013 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| ||||| || | || || | |||||||||| ||| Sbjct 90014 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 90073 Query 21069 ACGCCTTCCTTGTC 21082 | ||| |||||||| Sbjct 90074 ATGCCCTCCTTGTC 90087 >seq663 Length=530868 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 20986 CCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAA 21045 |||| || ||||| ||||| | |||||| || | ||||| ||||| ||||| || | | Sbjct 493144 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 493085 Query 21046 TAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGC 21105 | || | |||||||||| ||| | ||| |||||||| |||||| || || | | Sbjct 493084 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 493025 Query 21106 CGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAA 21165 ||| || || || ||| || | ||| ||||||||||| || | || ||||| | Sbjct 493024 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 492965 Query 21166 A 21166 | Sbjct 492964 A 492964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422255628478904