Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq204 329 3e-85 seq16 149 6e-31 seq663 138 1e-27 seq235 123 3e-23 >seq204 Length=141573 Score = 329 bits (364), Expect = 3e-85 Identities = 579/843 (69%), Gaps = 64/843 (8%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||| | |||||| | || || Sbjct 65316 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGATCTC 65375 Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | |||| | |||||| |||||||| |||||| Sbjct 65376 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCC 65435 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || ||||| |||||||| || |||||||| |||||||| || |||||||| Sbjct 65436 CACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCGC 65495 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| |||| | |||| ||| | ||||||| || |||||||||||||| |||||| || Sbjct 65496 TTCAGCTCCG-AGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 65554 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | |||||||| | || ||| |||||||||||||||| | || | | Sbjct 65555 GGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGCCCAA 65614 Query 116932 GGAGAAGCTCC-GTTTGTTGAACGCCATCG--------------------AGACGATGCC 116970 | || || || |||| |||||||||| | |||||| | Sbjct 65615 GCAG-CGCACCTACCTGTTCAACGCCATCGACAACAGTATGATACACCCCACACGATGAC 65673 Query 116971 GT------------------GCGTCA--------------AAGA-GAAGGCCGAGTGGGC 116997 | |||||| |||| ||||||||| ||||| Sbjct 65674 ATGGAGCATTGATCACTAACGCGTCATAGTTCCCTGCATCAAGAGGAAGGCCGACTGGGC 65733 Query 116998 GCTGCGCTGGATCGCCGGCAGAGAGGCCG-CCTTCGGCGAGCGCCTGGTGGCCTTCGCGG 117056 |||||||||||| || || ||| || |||| | ||| ||| | |||||||| | Sbjct 65734 TCTGCGCTGGATCTGCGACA-AGAACTCGACCTTTGCATCGCGTCTGATTGCCTTCGCCG 65792 Query 117057 CCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCG 117116 |||||||||| ||||||| ||| |||||| |||| || ||||||||||| |||| Sbjct 65793 CCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCG 65852 Query 117117 GCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATT 117176 | || |||||||| || || ||| |||||||||||| ||| | || ||||| |||| Sbjct 65853 GTCTTATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAGGGCATGCACA 65912 Query 117177 GCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCA 117236 |||||||||||| |||||||| ||| | | | || ||| | | | || Sbjct 65913 CCGACTTTGCCTGCCTGCTGTTCTCGCACATCAAGTCGAAGCCCAGCCCCGAGGCTGTTG 65972 Query 117237 GGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGG 117296 | |||| ||| ||| || |||| |||||| || ||||| || || |||||||| | Sbjct 65973 AGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCCCG 66032 Query 117297 TGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGAC 117355 | ||| || || | || ||| | | |||| || ||||||||||||||||| ||| Sbjct 66033 TCGCTCTTCTCGGCATGAA-TGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCGGAC 66091 Query 117356 AGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTT 117415 | |||||| | | ||| | | | ||| |||||||| | ||||||| | ||||| Sbjct 66092 CGCCTGCTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTC 66151 Query 117416 ATG 117418 ||| Sbjct 66152 ATG 66154 >seq16 Length=352857 Score = 149 bits (164), Expect = 6e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| ||||||||| | || ||||| | | Sbjct 16975 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGTCATCG 17034 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| |||||||||||| ||||||| Sbjct 17035 GACACGATCGACAACG-TGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCA 17093 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| |||||| || |||||||| |||| || |||||| |||||||| Sbjct 17094 GCAGCGTCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAA 17153 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| ||||||||| | || ||||||| || |||| || | || ||| Sbjct 17154 CATTCAGAAGGAGTCGACTTTGCATCTGGTACTGCGTCTGCGCGGTGGC 17202 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || || ||||| |||| || ||| | || Sbjct 17203 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACGCTCGAGGTTGAATCTTCC 17262 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || |||| ||||| ||||| ||||| |||| || Sbjct 17263 GACACGATCGACAACG-TGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCGGATCA 17321 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || |||||||| |||| |||||| ||| |||||||| Sbjct 17322 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACGCTCTCTGACTACAA 17381 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||| |||||| | || ||||| Sbjct 17382 CATCCAAAAGGAGTCGACCCTGCA 17405 Score = 118 bits (130), Expect = 1e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773 || ||||| ||||||||| | || ||||| || | |||| | | | | ||||| Sbjct 16771 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAATGTCAAGTCG 16830 Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || || | ||||| |||||||||||| |||||||||| || | |||| ||| ||||| Sbjct 16831 AAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 16890 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| || || | || ||||| |||||||||||||||||||||| | || || || Sbjct 16891 CAGCTTGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCGACTCTCCAC 16950 Query 40894 CTAGT 40898 || || Sbjct 16951 CTCGT 16955 Score = 111 bits (122), Expect = 2e-19 Identities = 139/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| | || ||||| | |||||| | | | |||| ||||| Sbjct 16486 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACG-TCAAG 16544 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | || || || ||||| || |||| ||||| || | |||| ||| ||| Sbjct 16545 AGCAAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCCGGC 16604 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || || | |||||||| |||||||||||| ||||||||| |||| || Sbjct 16605 AAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCTT 16664 Query 40891 CATCTAGT 40898 ||||| || Sbjct 16665 CATCTCGT 16672 >seq663 Length=530868 Score = 138 bits (152), Expect = 1e-27 Identities = 139/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| |||| ||||| || | |||| | | Sbjct 492964 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 493023 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||| ||| |||||||||| || || Sbjct 493024 GACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 493083 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || || | |||||||| ||||||||||||||||||| Sbjct 493084 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAG 493143 Query 40879 G 40879 | Sbjct 493144 G 493144 >seq235 Length=704811 Score = 123 bits (136), Expect = 3e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||||||| |||||||||| || || |||| ||| ||||| ||||| || Sbjct 90087 GACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 90028 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | |||||||| ||||||||||||||||||||| |||| || || || ||| || Sbjct 90027 GATGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTG 89968 Query 40903 CGCTTGAGGGGCGGCG 40918 ||| || | || |||| Sbjct 89967 CGCCTGCGTGGTGGCG 89952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515214730473440