Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq611 118 2e-21 seq101 84.2 5e-11 >seq611 Length=233400 Score = 118 bits (130), Expect = 2e-21 Identities = 143/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 254195 ACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGA 254254 ||||| || ||||| |||||| || | ||||| |||||||| |||| ||||||| || Sbjct 202929 ACCCG--TGCCCGCCGTTCAAGATCATCATCCTCGACGAGGCCGACAGCATGACGCAGGA 202986 Query 254255 CGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCT 254314 ||| ||| ||| || ||||| || ||||||||| |||| | || || || ||||| Sbjct 202987 CGCCCAGAGCGCGCTGCGCCGCACCATGGAGACGTACTCGCGCATCACCCGCTTCTGCCT 203046 Query 254315 GGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCG 254374 || ||||||||||| | ||||||| |||||| || || ||| ||||||| || Sbjct 203047 CGTCTGCAACTACGTCACCCGCATCATCGACCCGCTCGCCAGCCGCTGCTCCAAGTTCCG 203106 Query 254375 ATTCAGCACCCTCG 254388 |||| | ||||| Sbjct 203107 CTTCAAGAGCCTCG 203120 >seq101 Length=66550 Score = 84.2 bits (92), Expect = 5e-11 Identities = 241/365 (66%), Gaps = 7/365 (2%) Strand=Plus/Plus Query 249297 GTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCAT 249356 ||||||||||||| | || || ||||| || || | | |||||| || | Sbjct 6389 GTGGCACGCCGATGTCTTTGACTTCCTCAACCTGGGCCGCAGCGGCGGCAAGGATGAGCT 6448 Query 249357 GAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAA 249416 | | || || ||||| ||||| |||||||| | ||| ||||||||||||| ||| | Sbjct 6449 GCGGGCACGCGACCTGGCCTACGCGCTGTGGGTGCCGGACCTGTTCATGCGCCGGGTCGA 6508 Query 249417 GGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATCGATCTAC 249475 |||||||| |||||||| | | ||| |||| | ||||| ||| |||| || | Sbjct 6509 CCAGGACGGCGACTGGACGCTGATGTGCCCGGCCGAGTGTCCCGG-GCTCGTCGA-CTGC 6566 Query 249476 -ACGGCGCCGACTTCGACCAAGCCTATAAGAAATACGAATCCAACGGCATCGGCAAG--- 249531 ||| | ||| |||||| ||| || | ||||| | ||| |||| | Sbjct 6567 TACGCGGGCGAGTTCGACGCGCTCTACGAGCAGTACGAGGGGACGGGCCGCGGCCGGCGC 6626 Query 249532 ACAATCAAGGCTCGGACCCTTTTTGCGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGG 249591 || ||||||| || | || | || ||||| ||| ||||| ||||| || ||| Sbjct 6627 ACGCTCAAGGCGAGGGCACTGTGGTCGGCCGTGGTCGAGATGCAGATGGAGACGGGCGGG 6686 Query 249592 CCGTATTATTTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCATCTTGGTACC 249651 || ||| ||| ||||| ||||||| |||||| ||||| ||| || || || Sbjct 6687 CCAAGCGTGCTGTACAAGGACGCCTGCAACGTCAAGAGCAACCAGAAGCACCTCGGGCCC 6746 Query 249652 ATCCG 249656 |||| Sbjct 6747 GTCCG 6751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073756852203392