Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq664 248 8e-61 seq204 111 1e-19 seq16 105 6e-18 seq101 87.8 2e-12 >seq664 Length=348155 Score = 248 bits (274), Expect = 8e-61 Identities = 462/676 (68%), Gaps = 2/676 (0%) Strand=Plus/Plus Query 23026 CGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACA 23085 |||||| | ||||| || || ||||| || || |||||||| || || ||| || Sbjct 292735 CGAGGCCAAGTTGCAGACAGCGACCTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCA 292794 Query 23086 TAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATC 23145 || ||| | ||||| || | || | |||||||| || || ||||| ||| Sbjct 292795 AAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 292854 Query 23146 CTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACAT 23205 |||||| |||||| | || | || ||||||||||| | ||||| || || ||| | Sbjct 292855 CTTGTACAGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAAAG 292914 Query 23206 AGTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACG 23264 |||||||| | || ||| |||| | | || || | |||||||| | ||| | | Sbjct 292915 CTTCTGAGCGCGGACG-GTCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAG 292973 Query 23265 CGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGAC 23324 | || || ||| | || ||| || ||||| || || | | | || |||||||| Sbjct 292974 CCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGG 293033 Query 23325 TCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGA 23384 |||| | || | || || ||| |||| || ||||| || ||||| |||||||||| Sbjct 293034 TCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGA 293093 Query 23385 ACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCA 23444 |||| ||||| || || || ||||| |||||| |||||| | ||| | || | Sbjct 293094 ACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCAAGGAAACTGA 293153 Query 23445 ACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGC 23504 | ||||| || ||||| ||||||||||| | ||| || || ||||| | ||| ||||| | Sbjct 293154 AGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCAC 293213 Query 23505 CCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGG 23564 |||| || ||||| || || ||||||||||| || | ||||| || | | |||||| Sbjct 293214 CCTGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGC 293273 Query 23565 ACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAAC 23624 | |||| ||| || | ||| | || || | | |||||| | || || Sbjct 293274 TAGTGCCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGAC 293333 Query 23625 CTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCT 23684 | |||||||| | | || || ||||| ||||| || || ||||||||||| || | Sbjct 293334 CGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGT 293393 Query 23685 CGATGCTGTCCTCTTT 23700 ||||||| ||||| || Sbjct 293394 CGATGCTATCCTCCTT 293409 Score = 156 bits (172), Expect = 4e-33 Identities = 417/634 (66%), Gaps = 5/634 (1%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTAT-GGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163 || ||| || || ||||| || |||| ||||| | | || || || || ||||||| Sbjct 291814 CTGGTCGACAGTGAACTGAATTGGCGCA-GCGGCGGCCTGCGTACGGAGGTAGTACATGC 291872 Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223 | ||||| ||||| | |||||| | ||| || |||||||| | || || | | Sbjct 291873 CAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATCGACGTGATCTTGCCCATCGTAG 291932 Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283 | | ||||| | |||| ||| || ||| || || || || || |||||||| | Sbjct 291933 GGTCTTTCATGTGGATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCAG 291992 Query 22284 CCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 |||| | | | || ||| || | ||||| || |||||||| || | |||| | Sbjct 291993 CCATCTGGACGATGGTGCGCTGAGAAAGCTCCCAGACCGTCTTGTAGAGCGCCTTGATGT 292052 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403 | || || |||| ||||| ||| ||||| ||||| || || | Sbjct 292053 CGTCGGGAATGTTGGGGATCTGCTGGATGGAACCGTTGGAAGCGATGATGCGGTTCTTCA 292112 Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463 || ||| ||||| |||| | || ||| || |||| || |||| || || | Sbjct 292113 TCTGATCAGACCACAGGCCGAGGTCGACCAAGTCCTTGAGGAGCCAGGGGTTGACGACCT 292172 Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 |||||||||| | || || ||||| ||| ||||| || ||| |||| |||||| | | Sbjct 292173 GAAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGCTCGAAACACT 292232 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 | ||| || || |||||| |||||| ||||| ||||| || || | || || |||| Sbjct 292233 CGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGAGAGT 292292 Query 22584 TTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACG 22643 | | | ||||||| | ||| | | ||| | | ||||||||| || |||| || Sbjct 292293 TGCGGATACCGTGCTGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCAAAGGTCGGTCG 292352 Query 22644 GCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGT 22703 | | | |||| |||||| ||||| |||| | ||| || || || ||||| | | Sbjct 292353 GTG---CCTTGTTCCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGGACTGCCCTGGA 292409 Query 22704 ACGTTTCGTACGGACCATATATCGCGGCAAGTTC 22737 | || ||||| ||||||| | | |||||| || Sbjct 292410 AGGTCTCGTAGGGACCATGGAGCTTGGCAAGATC 292443 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/214 (69%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 23768 GCGTGCGTAAAGTATCCATTC---GACATTAGATTGTACGTGTCGATGGCGGCATCAATG 23824 ||||| || |||||| ||| ||||| || ||||| || |||||||| |||||| Sbjct 293530 GCGTGAGTGAAGTAT---TTCAGGGACATGAGGTTGTAAGTCTCGATGGCCTTCTCAATG 293586 Query 23825 TCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTG 23884 ||||| ||||| || || | ||||| ||||| ||||| | ||| || | |||| || Sbjct 293587 TCCTCGCCGTGAATGCCAACAGCGACACGCATAATCATCTGTTGCGGCCGCTCGGCCACC 293646 Query 23885 ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAG 23944 || | || || ||| ||||| | | || || || || || || || | || Sbjct 293647 TTTCCATCGATGCGGAGCAGGTATGACCTCTCCAGAGTCTTGAAGCCGAAGTATTGGTAC 293706 Query 23945 TTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 | |||||| || |||| || |||||||| |||| Sbjct 293707 TGAAAGTCGCGGTCGTAGACGATGGCCGAGTTCA 293740 >seq204 Length=141573 Score = 111 bits (122), Expect = 1e-19 Identities = 308/461 (67%), Gaps = 16/461 (3%) Strand=Plus/Plus Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || || || |||||||||||||| ||||| ||||| ||| ||| || | || || Sbjct 65777 CTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTC 65836 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| | ||||| ||||| || |||||||| || || || ||||||| | || || || Sbjct 65837 TGGCTCAAGAAGCGCGGTCTTATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGT 65896 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT--TGTCAATAAAC 58152 || ||||| | || || || ||||| ||||| ||| ||| ||||| ||| || | Sbjct 65897 GATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCACATCAAGTC--GAAGC 65954 Query 58153 CGACGCGGGATCGCATCTTG-GA-CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210 | | | || | | ||| || || |||| |||||| |||| ||||| || ||||| Sbjct 65955 CCAGCCCCGA--GGCTGTTGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTT 66012 Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAA--CAATGATTTGATGTCAAAG 58268 | || || || || || || || | ||||| ||||| | | | | |||| || Sbjct 66013 CCTGACGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACG--CTCATGTGCCAG 66070 Query 58269 TACATTGAGTTTGTTGCCGACAGACTTTTGCT--CGAACTGATTGGAGAGCGTCATTACA 58326 ||||| ||||| || || ||| | || || | || | | ||| || | |||| Sbjct 66071 TACATCGAGTTCGTCGCGGACCGCCTGCTGGTGGCGCTCGGCAACAAGA-AGT-ACTACA 66128 Query 58327 ACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTT 58386 || | | || || || || || ||| | || |||||| |||||||| ||||| | Sbjct 66129 ACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGTGGCAAGACCAACTTCT 66188 Query 58387 TCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 |||| || ||| | || || || || |||||| ||| Sbjct 66189 TCGAGAAGCGTGTTGGTGACTACCAGAAGGCCGGCGTCATG 66229 >seq16 Length=352857 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| || || || ||||| |||| |||||| | || Sbjct 17202 CATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACGCTCGAGGTTGAATCTTC 17261 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || | || ||||||||| || | ||||| || || Sbjct 17262 CGACACGATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCGGATCA 17321 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || |||||||| || ||| |||| ||| || | || || || Sbjct 17322 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACGCTCTCTGACTACAA 17381 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| ||||| || ||||| || || |||| ||| | ||| | || || Sbjct 17382 CATCCAAAAGGAGTCGACCCTGCACTTGGTGCTTCGTCTGCGTGGTGG 17429 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || |||||| | || || || | || Sbjct 16975 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGTCATCG 17034 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || |||||||| ||| | || || |||||| Sbjct 17035 GACACGATCGACAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAG 17094 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || || ||| |||| ||| || | || || ||| Sbjct 17095 CAGCGTCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAAC 17154 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || |||||| | ||||||||||| Sbjct 17155 ATTCAGAAGGAGTCGACTTTGCATCTGGTACT 17186 >seq101 Length=66550 Score = 87.8 bits (96), Expect = 2e-12 Identities = 249/381 (65%), Gaps = 15/381 (4%) Strand=Plus/Minus Query 23104 CGTGCCCAAATTGCT-CTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACG 23162 || |||| | |||| ||||||||| || ||||| | |||||||| |||| | | Sbjct 6747 CGGGCCCGAGGTGCTTCTGGTTGCTCTTGACGTTGCAGGCGTCCTTGTACAGCACGCTTG 6688 Query 23163 GCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTC-------TGAGCG 23215 || ||||||||| | |||| ||||| | || ||||| | | |||||| Sbjct 6687 GCCCGCCCGTCTCCATCTGCATCTCGACCACGGCCGACCACAGTGCCCTCGCCTTGAGCG 6628 Query 23216 TGAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCG 23275 || | | ||| | || || ||||||||| | ||| | |||||| || ||| Sbjct 6627 TGCGCCGGCCGC--GGCCCGTCC-----CCTCGTACTGCTCGTAGAGCGCGTCGAACTCG 6575 Query 23276 GCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAG 23335 | |||| |||||| | || ||||| | | ||| ||||| || |||| | Sbjct 6574 CCCGCGTAGCAGTCGACGAGCCCGGGACACTCGGCCGGGCACATCAGCGTCCAGTCGCCG 6515 Query 23336 TCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGG 23395 || | || || || | ||| || || ||||| | ||| || |||||| ||| ||||| Sbjct 6514 TCCTGGTCGACCCGGCGCATGAACAGGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGT 6455 Query 23396 GCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCA 23455 || |||| ||| || |||||| | | || | | ||||| || || || || Sbjct 6454 GCCCGCAGCTCATCCTTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACATCGGCG 6395 Query 23456 TGCCACGGCTCGAGGTAAACG 23476 ||||||||||| ||||| ||| Sbjct 6394 TGCCACGGCTCCAGGTAGACG 6374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445762532976480