Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq312 87.8 1e-12 >seq312 Length=273352 Score = 87.8 bits (96), Expect = 1e-12 Identities = 113/151 (75%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 33571 CCAGAGATGGGCGACAAGTTTGCATCGTT-CACGGCCCAGAAGGGCA-CGTGCGGCATGA 33628 || ||| ||||||||||||| | ||| ||||| | | |||||| ||| |||||| | Sbjct 175146 CCCGAGCTGGGCGACAAGTTCTCGTCGCGGCACGGGCAA-AAGGGCGTCGT-CGGCATCA 175089 Query 33629 TGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCA 33688 | ||| ||| |||||||||||||| | | | ||| | ||||||| | |||| | Sbjct 175088 TCGCCGAGCAGACGGACATGCCGTTCAACGACCAAGGCATCTGCCCGGACATCATCATGA 175029 Query 33689 ACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 ||||||| | ||||| |||||||||||||| Sbjct 175028 ACCCGCACGGCTTCCCGTCGCGCATGACGGT 174998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356230586931682