Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq204 123 4e-23 >seq204 Length=141573 Score = 123 bits (136), Expect = 4e-23 Identities = 233/336 (69%), Gaps = 10/336 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| || || ||||| | || ||| | ||||| Sbjct 65316 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGATCTC 65375 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | || | | || ||||| || || || Sbjct 65376 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCC 65435 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| || | |||||||| |||| || ||||| ||||| ||||| || || || || || Sbjct 65436 CACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGA-GCG 65494 Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 ||| ||| ||| | || || |||| ||||| ||||| ||||| ||||||| Sbjct 65495 CTTCAGCTC-CGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGA 65553 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314 | |||||| | |||||||| | ||||| || || |||| ||||||| |||| || Sbjct 65554 TGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGCCCA 65613 Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACA 125349 ||| || | || || || ||||| ||||||| Sbjct 65614 AGCAGCGCACCTAC---CTGTTCAACGCCATCGACA 65646 Score = 120 bits (132), Expect = 5e-22 Identities = 290/433 (67%), Gaps = 17/433 (4%) Strand=Plus/Plus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||| | || ||||||||||| ||||| |||||||| || || || ||||||| Sbjct 65777 CTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTC 65836 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||||||||||||||| || |||||||| || || | |||||| | || || || Sbjct 65837 TGGCTCAAGAAGCGCGGTCTTATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGT 65896 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGA 125605 || |||||| | ||| ||||||||| || ||||| ||||| ||| || | | Sbjct 65897 GATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCA--CATC-AAGT-CGAA 65952 Query 125606 GTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACA 125665 | ||| || | || || |||| ||| ||| || || || || | Sbjct 65953 GCCCAGCCCCGAGGCTGTTGAGAGGATCATCAT------CGAGGCTGTCGATATCGAGAA 66006 Query 125666 AGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTG 125725 ||||| || || || | || || ||| | | |||||||| || ||| ||||| Sbjct 66007 GGAGTTCCTGACGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTG 66066 Query 125726 CGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---T 125782 | ||||||| ||||| || || || || || ||| | | | | ||| ||||| Sbjct 66067 CCAGTACATCGAGTTCGTCGCGGACCGCCTGCTG---GTGGCGCTCGGCAACAAGAAGTA 66123 Query 125783 TTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAA 125842 |||||||||| || ||||| || |||||| | ||| || || || |||||||| Sbjct 66124 CTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGTGGCAAGACCAA 66183 Query 125843 CTTTTTCGAGAAG 125855 ||| ||||||||| Sbjct 66184 CTTCTTCGAGAAG 66196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741052771311440