Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq15 102 1e-17 seq291 95.1 2e-15 >seq15 Length=685051 Score = 102 bits (112), Expect = 1e-17 Identities = 84/100 (84%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| || | Sbjct 450522 CGCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCCA 450464 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 |||| ||||| || ||||||||||| ||||||||| |||| Sbjct 450463 TCCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTC 450424 >seq291 Length=11828 Score = 95.1 bits (104), Expect = 2e-15 Identities = 83/101 (82%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||||| | || || |||||||| || ||||||||||| || || Sbjct 9237 GCCAAGCGTCACAGGAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCCAT 9295 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| ||||| ||||| || ||||||||| |||||| Sbjct 9296 CCGTCGTCTCGCTCGCCGTGGCGGTGTCAAGCGTATCTCTG 9336 Score = 93.3 bits (102), Expect = 7e-15 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| ||| |||||| |||||| || ||||||| ||||| Sbjct 9389 TGATCTACGAGGAGACCCGTGGTGTCCTGAAGACCTTCCTTGAGGGTGTTATCCGTGATG 9448 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| || |||||| |||| | ||||| | Sbjct 9449 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTTACCTCCTTGGACGTGGTCTACG 9508 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | || | |||||||| | | || ||||| || ||||| Sbjct 9509 CCCTCAAGAGGCAAGGCCGCACCCTCTACGGTTTCGGTGGTTAA 9552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074565470942