Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq664 277 5e-69 >seq664 Length=348155 Score = 277 bits (306), Expect = 5e-69 Identities = 1047/1612 (65%), Gaps = 42/1612 (3%) Strand=Plus/Minus Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| ||| |||||||| | || || ||| || | |||||||| || | | ||||||| Sbjct 293465 TGTTCAACGCTGGAACCCCCAAGCCTCAGTTGGCGTCTTGCTTCCTCATCGACATGAAGG 293406 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | ||| |||||| ||||||| ||||| || |||| || || | || ||||||| | Sbjct 293405 AGGATAGCATCGACGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGACCG 293346 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | || || || ||| | | ||| | ||||| || | || |||||| ||| Sbjct 293345 CTGGAGGCATCGGTCTCAATGTTCACCGCATCCGTGCCACTGGT-AGCTACATTGCTGGC 293287 Query 363748 ACAGGGGGATACTCGAATGGGCTGG-TTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| | | |||| | ||||||||||||| || | |||| |||||| | Sbjct 293286 ACCAACGGC-ACTAGCAACGGCTTGATTCCCATGCTTCGCGTCTACAACAACACTGCGCG 293228 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||||| ||||||||||| ||||| || || || || || || |||||||| Sbjct 293227 CTACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTCGAGCCATG 293168 Query 363867 TCATGCCGATATTTTTGAGTTTC-TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || ||||| | || |||||| |||| || || || ||| || || |||||| | | Sbjct 293167 GCACGCCGACGTCTTC-AGTTTCCTTGATCTTCGCAAGAACCACGGCAAGGAGGAAGTCC 293109 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985 | || || || |||||||| || || ||| || |||| | || ||||| || || ||| Sbjct 293108 GGGCTCGCGACCTGTTCTACGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAG- 293050 Query 363986 CAGGTAAGAAT-TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 ||| | | ||| | ||| | ||||| |||| || || || || | ||||| | Sbjct 293049 CAGAACGGCACCTGGACCCTCATGTGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTAT 292990 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || ||||| | | ||||| ||||| |||| || |||||| | ||| |||| Sbjct 292989 GGAGACGAGTTCGAGGCTCTTTACGAGCAGTACGAGAAGGAGGGTCGCGGCCGTGAGACC 292930 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 | | ||| |||||||| |||| ||||| | || | ||| | ||||| || | ||| Sbjct 292929 GTCCGCGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGGTCGAGACCGGTAACCCC 292870 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||| ||||||| ||| |||||||||||| |||||| || |||||||||| | | Sbjct 292869 TTCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACGA-T 292811 Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | |||| |||||| || |||||| | || ||||| || ||||| ||| || || Sbjct 292810 CCGCAGCTCCAACCTTTGCTGCGAGATCGTCGAGTACACTGCCCCCGATGAGGTCGCTGT 292751 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAG------ATGGTACTTTTGA 364337 || ||| | || ||| | || || ||| | || || | | | ||| | || Sbjct 292750 CTGCAACTTGGCCTCGCTGGCTCTCCCGACCTTCGTCGACGTTGAGAACGGTGTCTACGA 292691 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCA-ATCTCG-ACAAGGTTATC 364395 | | || | ||| | || || ||| | |||| | || | | || | ||||| | ||| Sbjct 292690 CTTCAAGAAGCTTCACGAGGTTACCCA-GGTGCT-CGTGAAGAACTTGAACAAGATCATC 292633 Query 364396 GACAAGAATTATTATCCAATTCCTGAAGCC-GAGCGTTCTAATATGCGTCATCGCCCGAT 364454 |||| || | || || | || || ||| || | | || |||||||| ||||| || Sbjct 292632 GACATCAACCACTACCCGGTGCCCGAGGCCAGAAAGAGC-AACATGCGTCACCGCCCCAT 292574 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTC 364514 | | ||||| | || || || || | || || || ||| | || ||||| Sbjct 292573 CGCAGTGGGTGTCAACGGTCTTGCCGATGCCTTCCTGGCTCTTCGCATGCCTTTCGATTC 292514 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 || || || || || | |||| || || || || || ||| | || || Sbjct 292513 CCCCGAGGCCAAGCAGCTCAACATCCAGATTTTCGAGACCATCTACCATGCATCCATCAC 292454 Query 364575 TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG--GTCC--C 364630 ||| ||| |||| | || || | | || ||| || | |||| |||| | Sbjct 292453 TGCCTCGATTGATCTTGCCAAGCTCCATGGTCCCTACGAGACCTTCCAGGGCAGTCCTGC 292394 Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGA---- 364686 |||| ||||| | | |||| || | ||||| || | || | | |||| Sbjct 292393 CTCT----CAGGGCATCCTGCAGTACGACATGTGGAA---CAAGGCA-CCGACCGACCTT 292342 Query 364687 TGGAACTGGGATA-CGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGT 364745 ||| ||||||| | || | | | | || |||| |||| |||||||| || | Sbjct 292341 TGGGACTGGGACAGCGTGAAG-GCTGAGATTGCTCAGCACGGTATCCGCAACTCTCTGCT 292283 Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805 || ||||||||||| || || || ||||||||||| ||||||||| ||||| Sbjct 292282 CGTCGCACCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACGAGTGTTTCGA 292223 Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865 |||| || || | || || ||||| || || | || || |||| ||| || || Sbjct 292222 GCCGTACACGTCGAACATCTACTCTCGCCGTGTGCTGGCTGGCGAGTTTCAGGTCGTCAA 292163 Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA-CAGCATGAAGAACT 364924 | || ||||||| | ||||| ||| |||||| ||| ||| ||||||||| Sbjct 292162 CCCCTGGCTCCTCAAGGACTTGGTCGACCTCGGCCTGTGGTCTGATCAG-ATGAAGAACC 292104 Query 364925 ATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGC 364984 |||||||| | || ||||| | ||| | || || |||| || || | ||| Sbjct 292103 GCATCATCGCTTCCAACGGTTCCATCCAGCAGATCCCCAACATTCCCGACGACATCAAGG 292044 Query 364985 CTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATC 365044 | | ||||| || || ||||| |||| ||| || || | | ||||| ||||||| Sbjct 292043 CGCTCTACAAGACGGTCTGGGAGCTTTCTCAGCGCACCATCGTCCAGATGGCTGCCGATC 291984 Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCG 365104 | ||||| || || ||| ||| ||| | ||| | ||||| | || || | Sbjct 291983 GGGGTGCCTTCATTGACCAGTCCCAATCGCTCAACATCCACATGAAAGACCCTACGATGG 291924 Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| | || || ||||| || || ||||| |||||| ||||| || Sbjct 291923 GCAAGATCACGTCGATGCACTTTGCTGGCTGGAAGCTCGGTCTCAAGACTGG 291872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303342010742708