Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq204 89.7 4e-13 seq16 87.8 2e-12 >seq204 Length=141573 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651 ||| || || || || || || || || || |||||||| || ||||| || | ||| Sbjct 66211 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACTGAGCGAAATGTTCTCCAT 66152 Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711 || ||||| || || | || | || || | || ||| ||| | | || ||| || Sbjct 66151 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACCAGCAGGCG 66092 Query 104712 ATCCGCCACAAATTCGATGTACTCGCACATAGAATGTG-CATTCATGCCCAGCATTGCGA 104770 ||||| || || |||||||||| |||||| || ||| |||||||||| || | |||| Sbjct 66091 GTCCGCGACGAACTCGATGTACTGGCACAT-GAGCGTGGCATTCATGCCGAGAAGAGCGA 66033 Query 104771 CGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTC 104816 |||| | || | || | || || |||||||| || || || || Sbjct 66032 CGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTC 65987 >seq16 Length=352857 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| | || |||||| | |||||||||||| | ||||| ||||| || Sbjct 16500 ATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACGTCAAGAGCAAGATCCAGGAT 16559 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || |||||||| ||||| ||||| ||| | |||| | || ||||||||| || |||||| Sbjct 16560 AAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTTGAAGAT 16619 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 | | | | | | ||| || |||||||| || || || || ||||| Sbjct 16620 GGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCTTCAT 16667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429932363547570