Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq664 212 6e-50 seq204 140 3e-28 seq16 136 4e-27 seq235 109 5e-19 seq663 102 8e-17 seq101 98.7 9e-16 >seq664 Length=348155 Score = 212 bits (234), Expect = 6e-50 Identities = 831/1287 (65%), Gaps = 41/1287 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 |||||||||||||||||||| |||| |||||| || | || | ||| |||||| | || Sbjct 292163 TTGACGACCTGAAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGC 292222 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || ||| ||||||| ||| ||||| ||| ||||| |||||||||||| || || Sbjct 292223 TCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACG 292282 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | ||||||| || || |||| | | |||| ||||| Sbjct 292283 AGCAGAGAGTTGCGGATACCGTGCTGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCAA 292342 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || ||||| | || ||||||||||||||||| ||||||| ||| || ||| Sbjct 292343 AGGTCGGTCGGTGCCTTGTTCCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGGACTG 292402 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAG--TTTTGGCGAGCTCGCAACTCGCCTC-CAGA 145354 || || |||| ||| | ||| | ||||| || || | ||| | || Sbjct 292403 CCCTGGAAGGTCTCGTA--GGGACCATGGAGCTTGGCAAGATC---AATCGAGGCAGTGA 292457 Query 145355 GCGCCGAA--ATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCT 145412 | | | || || |||||| ||| || |||||||| || | || || | | Sbjct 292458 TGGATGCATGGTAGATGGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCGGGGGAAT 292517 Query 145413 CGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGG 145472 || | |||||||| || | || |||||||| || || | | ||||| |||||| Sbjct 292518 CGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGATGG 292577 Query 145473 GCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATATCGATTACGGTCGA 145529 | || || |||||||||| | || || |||| | || || | || ||||| Sbjct 292578 GGCGGTGACGCATGTTGCTCTTTCTGGC---CTCGGGCACCGGGTAGTGGTTGATGTCGA 292634 Query 145530 TAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAA 145589 | || || |||||||| ||| | |||| |||| | | | ||| | ||||| Sbjct 292635 TGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGT 292694 Query 145590 ACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTG 145649 | | | | |||||| | || || | || || | ||| ||||| || || || | Sbjct 292695 AGACACCGTTCTCAACGTCGACGAAGGTCGGGAGAGCCAGCGAGGCCAAGTTGCAGACAG 292754 Query 145650 CCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGG 145709 | ||| |||| | | |||| | ||||||||| ||| | ||| | ||| | Sbjct 292755 CGACCTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGAGCTGCGGATCG 292814 Query 145710 TTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTC 145769 | || || || | || || || || | |||||| |||||||| |||||| | || Sbjct 292815 TACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGT 292874 Query 145770 CGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGC--AAG-TCCTGCGCACGCACCT 145826 || ||||| ||||| | || ||| || || | ||| | ||| || || || Sbjct 292875 TACCGGTCTCGACCTGGG---CCTCGAGAATGGCGTACCAAAGCTTCTGAGCGCGGACGG 292931 Query 145827 GCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGT 145886 || || ||| ||||| | ||||| | | ||| || |||| ||| || || | Sbjct 292932 TCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCAT 292991 Query 145887 AGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGT 145946 | ||| | ||| || || |||| |||||| ||||| || | ||| |||||| | Sbjct 292992 AAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGCT 293051 Query 145947 TGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGC 146006 ||| || | ||| || | ||| || | ||| || ||||| | || |||||| || | Sbjct 293052 CGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGA 293111 Query 146007 AATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACTATAGATGTCCGCGTGCCAC 146065 ||||| || ||| | || | || ||| | ||| ||| ||| |||||||| Sbjct 293112 CTTCCTCCTTGCCGTGGTTCTTGC-GAAGATCAAGGAAACTGAAGACGTCGGCGTGCCAT 293170 Query 146066 GGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGT 146122 || || | |||| ||||| ||| || || |||||||||||||| |||| || Sbjct 293171 GGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTAGCGC 293230 Query 146123 ACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTA-CGCCGTTCGT--- 146178 | ||||||| ||||||| | |||||| | |||| | |||| |||||| || Sbjct 293231 GCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCG-TTGCTAGTGCCGTTGGTGCC 293289 Query 146179 AG-AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGC 146237 || | | || | | || || || | || |||||||| | |||| || || Sbjct 293290 AGCAATGTA----GCTACCAGTGGCACGGATGCGGTGAACATTGAGACCGATGCCTCCAG 293345 Query 146238 CGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC-- 146295 || |||||| || ||||||| ||| || |||||||| ||||| |||||||| Sbjct 293346 CGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATGCTATCCT 293405 Query 146296 GCTTCGAATGCCGAGCAGAAAGCACGA 146322 |||| ||| ||| || ||||| || Sbjct 293406 CCTTC--ATGTCGATGAGGAAGCAAGA 293430 >seq204 Length=141573 Score = 140 bits (154), Expect = 3e-28 Identities = 332/494 (67%), Gaps = 11/494 (2%) Strand=Plus/Plus Query 46106 CCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGG 46165 |||||||||| || |||||| | || | | |||| || || |||| || | | Sbjct 65724 CCGACTGGGCTCTGCGCTGGATCTGCGACAAGAACTCGACCTTTGCATCGCGTCTGATTG 65783 Query 46166 CCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCA 46225 |||| || || ||||| |||| || ||| || ||| ||||||| | ||| Sbjct 65784 CCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCA 65843 Query 46226 A-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284 | || | || | | |||||||| || || || ||||||||| || || || || ||| Sbjct 65844 AGAAGCGCGGTCTT-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAG 65902 Query 46285 GGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACAC-TCGCGTGCACGACAAGCTTG 46342 ||| |||| || |||||||| || || || | | ||| || || | | | ||| Sbjct 65903 GGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCACATCAAGTCGAAGCCCAGC--- 65959 Query 46343 CGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTA 46402 ||||| | || ||| || ||| ||||| || | || ||||||||||| | | Sbjct 65960 --CCCGAGGCTGTTGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGA 66017 Query 46403 CGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACG-CACAGTCAATGTGCGACTACATC 46461 ||| || ||||||| || || || |||||||| | ||| || |||||| | |||||| Sbjct 66018 CGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACGCTC-ATGTGCCAGTACATC 66076 Query 46462 GAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGC 46521 ||||| || |||||||| ||||| ||| ||| | | |||| | | |||| | Sbjct 66077 GAGTTCGTCGCGGACCGCCTGCTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACC 66136 Query 46522 AATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAG 46581 || || || || || ||| | ||||| || || ||||| || || || ||||| ||| Sbjct 66137 AACCCCTTCGACTTCATGGAGAACATTTCGCTCAGTGGCAAGACCAACTTCTTCGAGAAG 66196 Query 46582 CGCGTCGGCGAGTA 46595 || || || || || Sbjct 66197 CGTGTTGGTGACTA 66210 >seq16 Length=352857 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| |||||| || | ||| | ||||||||||| ||||||||||| || Sbjct 17202 GCCACCGCGCAGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGA 17143 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| |||||||| || ||| |||| | ||||||||||||||| || Sbjct 17142 GAGGGTACGGCCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGG 17083 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||| | | || | || || | ||||||| Sbjct 17082 GATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCGAC 17023 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || || || ||||| || ||||| Sbjct 17022 TTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 16975 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| || || | ||||||||||||||| |||||||| || Sbjct 17429 CCACCACGCAGACGAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAG 17370 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| |||| | ||||||||| ||||| ||| Sbjct 17369 AGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGG 17310 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | || |||| || || | Sbjct 17309 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACC 17250 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | || || || || || || || ||||| ||||||||| Sbjct 17249 TCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCATG 17202 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | ||| | ||| |||||||| ||||||||||| ||| | Sbjct 16690 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 16631 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || ||||||||||| ||| |||| || |||||||| |||||||| Sbjct 16630 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGAGGA 16571 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||||| | || | || |||| ||||||| Sbjct 16570 ATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACC 16511 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || ||||| Sbjct 16510 TCAAGGGTGATGGTCTTGCCGGT 16488 Score = 109 bits (120), Expect = 5e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||| ||| || ||| || ||||| ||||||||||| Sbjct 16943 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCAAGCTGCTTGCCA 16884 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || |||||||||||||| ||||| || || ||||| ||| ||| |||| Sbjct 16883 GCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 16824 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 | | || | || || | |||||||| || | ||| | ||| || || || Sbjct 16823 ACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 16771 >seq235 Length=704811 Score = 109 bits (120), Expect = 5e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| |||||||| | || | ||| |||||||| || |||||||| || Sbjct 89953 GCCACCACGCAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 90012 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| || Sbjct 90013 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 90072 Query 131127 GATTCCTTCTTTGTC 131141 ||| || || ||||| Sbjct 90073 GATGCCCTCCTTGTC 90087 >seq663 Length=530868 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| || |||||| ||||| ||||||||||| ||| ||| Sbjct 493144 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 493085 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||||| || || || || ||||| ||| || ||||| | | Sbjct 493084 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 493025 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| |||| ||| | ||| || || || || || || |||| Sbjct 493024 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 492965 Query 131225 A 131225 | Sbjct 492964 A 492964 >seq101 Length=66550 Score = 98.7 bits (108), Expect = 9e-16 Identities = 184/269 (68%), Gaps = 10/269 (4%) Strand=Plus/Minus Query 145738 GTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT 145797 |||||| ||||||||||| |||| | || ||||| ||||||| |||| |||| || | Sbjct 6716 GTTGCAGGCGTCCTTGTACAGCACGCTTGGCCCGCCCGTCTCCATCTGCATCTCGACCAC 6657 Query 145798 -----AAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCG 145852 | || |||| ||| | | | ||| || || ||||||| | ||| Sbjct 6656 GGCCGACCACAGTGC----CCTCGCCTTGAGCGTGC-GCCGGCCGCGGCCCGTCCCCTCG 6602 Query 145853 TATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTG 145912 || | | ||||||| | || ||| || ||||||| ||| || |||||||||| | Sbjct 6601 TACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTAGCAGTCGACGAGCCCGGGACACTCG 6542 Query 145913 TTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGC 145972 || |||||||||| ||| |||||| || ||| || ||| |||| || ||| Sbjct 6541 GCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCGACCCGGCGCATGAACAGGTCCGGC 6482 Query 145973 ACCCACAGCGCGTACATCAAGTCGCGCGC 146001 |||||||||||||| || |||||| || Sbjct 6481 ACCCACAGCGCGTAGGCCAGGTCGCGTGC 6453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008705288960