Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq16 170 4e-37 seq663 143 5e-29 seq204 136 7e-27 seq678 107 4e-18 seq664 89.7 9e-13 >seq16 Length=352857 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || |||| ||||| || | || ||||| || || ||||| || || ||| Sbjct 17201 CCACCGCGCAGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 17142 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || || | || ||||| || || Sbjct 17141 AGGGTACGGCCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGGG 17082 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| | ||| ||| ||||| ||||| | ||| || ||| Sbjct 17081 ATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCGACT 17022 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| || || ||||||||||||||||| || ||||| Sbjct 17021 TCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 16975 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || ||||| ||||||||||| || || ||| Sbjct 17429 CCACCACGCAGACGAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAG 17370 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||| || || | |||||| || ||||| ||||| | || || || || || Sbjct 17369 AGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGG 17310 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| ||| ||| ||||| ||||| | ||||| || Sbjct 17309 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACC 17250 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || ||||| || |||||||||||||| |||||||| Sbjct 17249 TCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCAT 17203 Score = 131 bits (144), Expect = 3e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | || | || || |||||||| || || ||||| || ||||| Sbjct 16690 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 16631 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| |||||||| || | | || || || || ||| Sbjct 16630 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGAGGA 16571 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || || ||||| ||||||| ||||||||||| | || || || Sbjct 16570 ATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACC 16511 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| || || |||| Sbjct 16510 TCAAGGGTGATGGTCTTGCCGGTGA 16486 Score = 120 bits (132), Expect = 6e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || |||||||| || ||||| Sbjct 16973 CCACCACGGAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 16914 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | | || ||||| || || Sbjct 16913 AGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 16854 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | |||||| ||||||||||| | || || || Sbjct 16853 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 16794 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACG 68450 || | ||||||||| || || || | || ||||| Sbjct 16793 TCAAGGGTGATGGTCTTGCCAGTCACTGTGATGACG 16758 >seq663 Length=530868 Score = 143 bits (158), Expect = 5e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| |||||||| || Sbjct 493142 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 493083 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| |||||||| || ||||| |||||| ||| Sbjct 493082 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 493023 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||||||||| || |||||||||||||||||||| Sbjct 493022 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 492964 >seq204 Length=141573 Score = 136 bits (150), Expect = 7e-27 Identities = 294/437 (67%), Gaps = 2/437 (0%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||||||||| ||||||||||| || || || |||||||||||||| |||||| Sbjct 66229 CATGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACT 66170 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||| |||||| |||||||||||| |||||||| |||| | | ||| || || Sbjct 66169 GAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 66110 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | |||||| || ||||||||||||||||||| ||| || | || Sbjct 66109 GAGCGCCACCAGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATT 66050 Query 10115 CATGCCAATCA-TGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 |||||| | | ||| | ||| | || || | ||| ||||| ||| | |||| | Sbjct 66049 CATGCCGAGAAGAGCGAC-GGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAG 65991 Query 10174 CTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACA 10233 | || || ||| |||| || | || || |||| || || | ||| ||| Sbjct 65990 CCTCGATGATGATCCTCTCAACAGCCTCGGGGCTGGGCTTCGACTTGATGTGCGAGAACA 65931 Query 10234 GGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAAC 10293 | || |||| | ||| | |||||| || ||| |||| ||||||||| || Sbjct 65930 GCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGG 65871 Query 10294 CCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGA 10353 ||||||||||| || || || || |||||||| |||| | ||| || ||| || Sbjct 65870 TGAGACCGGGCATAAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGA 65811 Query 10354 ACAGAAGACCCTCCACG 10370 | | | |||||| ||| Sbjct 65810 AGAAGATACCCTCGACG 65794 >seq678 Length=62356 Score = 107 bits (118), Expect = 4e-18 Identities = 663/1049 (63%), Gaps = 66/1049 (6%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| |||||| |||||| ||||| || || ||| |||||| Sbjct 3305 CGCCACTGGATGTACTCCGAGGGGGTGCTGTCCAAGTGGTGGTCGATGTGGGCGAAAGCG 3364 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| | ||| || || || ||||| || | | ||| ||| ||| || Sbjct 3365 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGGTGGTAGACATCACCCGAAGTGGGG 3424 Query 225101 -TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || || || || || ||||| |||| ||| |||| |||||| ||||| ||||| ||||| Sbjct 3425 ATGAGC-TCACCAGTCAGGACGTTGACGAGAGTAGACTTGCCGGCACCGTTGGGACCAAT 3483 Query 225160 CACGCCAATCCGGGAT--GACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGG 225217 ||| |||| ||||| || | ||| ||| || | | || | |||||| ||| Sbjct 3484 GACGGCAATACGGGAGCCGAGAGAGCA--CTGGAAGGTGATGTCGG---AGATCTG-GGG 3537 Query 225218 CC---AGTTT----GGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTT 225270 | || | |||| |||| || | | | | ||||| | |||| Sbjct 3538 CTTGGAGGTACCGGGGTACTGGAAGGTCATGTTGCTGACACGAACAATGGCCTTGGCCTT 3597 Query 225271 GGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTT 225330 || | | |||||| ||||| |||||||||||||||| ||| | ||| | | Sbjct 3598 GGTCTTGACACCCTCAAGGAAACCGGGCTCGGGGAACTTGAACTCCAGCTCCGAGGCACC 3657 Query 225331 CAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAG 225390 || |||||||| || || || ||| ||||| | || | ||| || | Sbjct 3658 GAGCTCGTAGTAGGACTTGGCAGAAGGAACCTTCTTGACGAACTCGGAGATGTTACCACG 3717 Query 225391 GTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGC----GT 225446 || | ||||||||| | || |||| || | || || || || || Sbjct 3718 GTAACGCTTGAGCTTGAAGCGCT---CGTAGTGGA----TGACGTGCTGGATGGTGTTGT 3770 Query 225447 CAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTTGAGG 225505 | | ||| |||||||| || | |||||||| | || | | ||| | |||| Sbjct 3771 CCAAGAACTTGGAGTCGTGAGAGATGATGATGGAGGTGCAAG---GAGAGGTGAT-GAGG 3826 Query 225506 TGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGC 225565 | | |||||| || ||||| |||||||||||||||| || || ||||| || || Sbjct 3827 TAGTTCTCGAGCCAAGCAACGTTCTTGACGTCCATGTGGTTGGTGGGCTCGTCGAGCAGA 3886 Query 225566 AGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCG 225625 || || || | || || || ||| || | |||| ||||||||| ||||| || || Sbjct 3887 AGAATATCGGGCTCCTCGAAGACGGCACGGGCAAGAGCCAGCTTCATCTTCCAACCACCA 3946 Query 225626 GACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTC-----GTCAAAGCCGTACTCCAGGA 225680 || || ||| ||| | | | || |||| | | | |||||| ||||| || Sbjct 3947 GAAAGCGAGGTGATGG-----GGGCGCCAAGCTGCTCACGGACGAAGCCGAACTCCTCGA 4001 Query 225681 GCGTCTGGATAATGCGCTCGGGAGAGCTGCGAGC-GGCAACGTTGGGGTCGGACGAGAGG 225739 | || | | | ||||| ||| || || || | ||||| ||| Sbjct 4002 GGGTGT---TCTCGACCTCGGT----CTGGGACTTGGTGACACCAG---CGGACTCGAGC 4051 Query 225740 TAAT-CAT----------AT-ACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCC 225787 | | ||| || |||||| || | | | | | ||| | |||||| || Sbjct 4052 TTCTTCATGGTCCAGTTGATGACGGTCTGCTCAGTGTCGGCGGAGTCGAGGTCGTGCTCG 4111 Query 225788 ACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATC 225847 ||||| || ||| || || || | ||| || ||||| ||||| | || || Sbjct 4112 ACGTAGACGGTCTTGACCTCGGACTGCTTGGGAAAACCCTCAAGCTGCTCGTTGTTGATG 4171 Query 225848 GCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCG 225907 ||||| | ||| || ||||||| | |||||||| |||| || |||||| | | || Sbjct 4172 GCACGCATCAGAGTGGTCTTGCCGGAACCGTTGGGGCCGAGCAGACCGTAACGCTGACCA 4231 Query 225908 CGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAAC 225967 ||||| | ||| | || ||| || ||||||||| |||| ||||| |||||||| Sbjct 4232 CGCTTCAGACGAAGGTGGGTCTGGTTAAGCAGGATCTTGGCACCGTAGGCCAGGGAGAAG 4291 Query 225968 TCGCAATCGCACAGGTCCTCACCCTCCTC 225996 ||| | ||| || |||||||||||||| Sbjct 4292 GTGCAGTTGCAAAGATCCTCACCCTCCTC 4320 >seq664 Length=348155 Score = 89.7 bits (98), Expect = 9e-13 Identities = 155/224 (69%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 31451 GTTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCATGCGCAGCTTGAAGAACACGTCCTG 31510 |||||| | ||||||| || || || ||||||||||| || | ||| | || Sbjct 292492 GTTGAGCTGCTTGGCCTCGGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGC 292551 Query 31511 AAGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTACTAGTCTTCGCCTCGGG 31570 |||||| | |||||||||| | || ||||| | |||||||| || | | |||||||| Sbjct 292552 AAGACCGTTGACACCCACTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGG 292611 Query 31571 AATTGCGTAGGACATGACGTCAATGCTCTTGTCGAGGTTCTTGGCCAGAATCT---TCAC 31627 | | |||| ||| ||| ||| |||||| | |||||| | || | || | || Sbjct 292612 CACCGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAAC 292671 Query 31628 GTGCTTGCGAAGGTCCTCAAAGTCGTAGGCACCGTTCTTGACGT 31671 || | |||| | || ||||||||| ||||||||| |||| Sbjct 292672 ---CTCGTGAAGCTTCTTGAAGTCGTAGACACCGTTCTCAACGT 292712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921614404925680