Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq16 87.8 2e-12 >seq16 Length=352857 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || | ||| | || || || || ||||||||||| ||| Sbjct 16693 ATACCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCG 16634 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||||||||| || || || ||| |||| | ||||| || |||||| Sbjct 16633 GACAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGA 16574 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| || || ||||| || | | || | |||||||| || ||| Sbjct 16573 GGAATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCG 16514 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | ||| | || |||||||| Sbjct 16513 ACCTCAAGGGTGATGGTCTTGCCGGT 16488 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || || | || || | ||| | || || || || ||||||||||| || Sbjct 17204 ATGCCACCGCGCAGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCC 17145 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| || || || || ||||| ||| |||| |||||||| |||||||| Sbjct 17144 GAGAGGGTACGGCCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGG 17085 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | ||||| | || ||| Sbjct 17084 GGGATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCG 17025 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || |||||||| || || || || || || ||||| Sbjct 17024 ACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 16975 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || ||||| |||||||| || | || || || || || || |||||| Sbjct 17399 GTCGACTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGCCCGTCCTCCAGCTGCTTACCA 17340 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| || ||||| || || || || ||||| |||||| || Sbjct 17339 GCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGAATCTTGCTCTTC 17280 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||||| ||||| || || | || | || || || ||||| || Sbjct 17279 ACGTTGTCGATCGTGTCGGAAGATTCAACCTCGAGCGTGATAGTCTTTCCAGTCAGGGTC 17220 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 17219 TTGACGAAGATCTGCATG 17202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420130846450728