Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq204 306 7e-78 seq664 295 1e-74 seq101 132 9e-26 seq666 98.7 2e-15 >seq204 Length=141573 Score = 306 bits (338), Expect = 7e-78 Identities = 610/907 (67%), Gaps = 69/907 (8%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || |||||| || ||||||||||| || Sbjct 65316 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGATCTC 65375 Query 42360 GCCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416 |||||||| || |||| | | || || |||| || ||| || Sbjct 65376 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCC 65435 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || |||||||||||||| || || ||||| || || |||||||| | | | Sbjct 65436 CACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCGC 65495 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 |||| ||||| ||| | ||||| ||||||||||||||||||||||| || Sbjct 65496 TTCAGCTCCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATG 65555 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| ||| ||| | || || |||||||||| || ||| Sbjct 65556 GAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGCCCAAG 65615 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGA--------------------CGATG---- 42632 |||| | | |||||||| ||||| || | ||||| Sbjct 65616 CAGCGCACCTACCTGTTCAACGCCATCGACAACAGTATGATACACCCCACACGATGACAT 65675 Query 42633 -----------------------------CCCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663 ||||||||||||| |||||| |||||||| | Sbjct 65676 GGAGCATTGATCACTAACGCGTCATAGTTCCCTGCATCAAGAGGAAGGCCGACTGGGCTC 65735 Query 42664 TCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 | ||||||| | | | || | | || || | | | ||| | ||||| ||||| Sbjct 65736 TGCGCTGGATCT-GCGACAAGAACTCGACCTTTGCATCGCGTCTGATTGCCTTCGCCGCC 65794 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGT 42781 |||||||| ||||||||| ||| |||||||||||||||||||||||||| || ||| Sbjct 65795 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 65854 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 | |||||||| ||||||||||| ||||| ||||| | | || ||||| |||| | Sbjct 65855 CT-TATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAGGGCATGCACAC 65913 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGT 42901 |||||||||||||| ||||||||| ||| ||| | |||||| ||| || Sbjct 65914 CGACTTTGCCTGCCTGCTGTTCTCG---CACATCAAGTCGAAGCCCAGCCCCGAGGCTGT 65970 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961 | ||||||| ||||| || || ||||||||||||||||| ||| | ||||||| Sbjct 65971 TGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCC 66030 Query 42962 CGTGTCCCTGGTCGGCATGAA--CCACGACCTCATGTGCAAGTACATCCAGTACGTCGCC 43019 ||| | || |||||||||| ||||| ||||||||| |||||||| ||| |||||| Sbjct 66031 CGTCGCTCTTCTCGGCATGAATGCCACG--CTCATGTGCCAGTACATCGAGTTCGTCGCG 66088 Query 43020 GACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGA 43078 |||| || || ||| | | | || || ||||||| | | ||||||||| Sbjct 66089 GACCGCCTGCTGGTGGC-GCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGA 66147 Query 43079 CTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGA 43138 ||| ||||||||||| ||| | |||||||||||||| ||||||||||| || | || Sbjct 66148 CTTCATGGAGAACATTTCGCTCAGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 66207 Query 43139 CTACCAG 43145 ||||||| Sbjct 66208 CTACCAG 66214 >seq664 Length=348155 Score = 295 bits (326), Expect = 1e-74 Identities = 1091/1692 (64%), Gaps = 63/1692 (4%) Strand=Plus/Plus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||| | || || ||||||||| || | |||||||||||||| |||||||| | Sbjct 291825 TGAACTGAATTGGCGCAGCGGCGGCCTGCGTACGGAGGTAGTACATGCCAGTCTTGAGAC 291884 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | |||| | | |||||| | ||| | ||| |||| | ||||| | Sbjct 291885 CGAGCTTCCAGCCAGCAAAGTGCATCGACGTGATCTTGCCCATCGTA------GGGTCTT 291938 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 | | || |||||| || ||| |||||| | ||||| |||| || || | Sbjct 291939 TCATGTG------GATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCAG 291992 Query 243921 CCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979 |||| || || ||| | |||||| | ||| | |||||||||||| | ||||| | Sbjct 291993 CCATCTGGACGATGGTGCG-CTGAGAAAGCTCCCAGACCGTCTTGTAGAGCGCCTTGATG 292051 Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039 | ||||| | ||| | ||| | || || ||| |||||| || | | Sbjct 292052 TCGTCGGGAATGTTGGGGATCTGCTGGATGGAACCGTTGGAAGCGATGATGCGGTTCTTC 292111 Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCACC 244096 || | ||| ||||||||| | | ||| ||| || || ||| | || || Sbjct 292112 ATCTGATCAGACCACAGGCCGAGGTCGACCAAGTCCTTGA---GGAGCCAGGGGTTGACG 292168 Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 ||||||||||| || | |||||| ||||| ||||| ||| || |||||||| Sbjct 292169 ACCTGAAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGCTCGAAA 292228 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 | ||| || ||| || ||||| || || || |||||||| | || |||||| Sbjct 292229 CACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGA 292288 Query 244217 CTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTC-GTTCCAGTCCCACATGCC 244275 ||| | | |||||| | | | | || || | | || ||||||||| | | | Sbjct 292289 GAGTTGCGGATACCGTGC-TGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCAAAGGTC 292347 Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGG 244335 |||| || || | ||||||||| ||||||| | |||| | | || Sbjct 292348 -----GGTCGGTGCCTT----GTTCCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGG 292398 Query 244336 GCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTC--- 244392 ||||||| | ||||| ||||||||| | | ||| ||| || | | || | | Sbjct 292399 ACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCAA---TCGAGGCAGT 292455 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 || || || | ||||||||||||||| ||| |||| | | ||||| | | | Sbjct 292456 GATGGATGCATGGTAGATGGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCGGGGGA 292515 Query 244453 GGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512 ||| || |||| | || |||| | ||||| || || | || || | |||| Sbjct 292516 ATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGAT 292575 Query 244513 GGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572 ||| | ||| ||| ||||| |||| |||||||| ||||| |||| |||||| Sbjct 292576 GGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 292635 Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632 | |||||| | ||| || || || || ||| ||| || |||||||| Sbjct 292636 GATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTA 292695 Query 244633 CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAG 244692 | | || || ||| | || ||| ||| || | ||||| Sbjct 292696 GACACCGTTCTCAACGTCGACG-----------AAGGTCGG-GAGAGCCAGCGAGGCCAA 292743 Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752 ||||||||| || ||||| || | | ||||||| ||| |||||| ||| ||||| Sbjct 292744 GTTGCAGACAGCGACCTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGA 292803 Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812 || ||| || || |||| || || ||| |||| ||||||| |||||||| || Sbjct 292804 GCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAG 292863 Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGC 244872 ||||||||| |||||||||| |||||| |||| | | || ||| || | | ||| Sbjct 292864 CATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAAAGCTTCTGAGC 292923 Query 244873 CTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931 ||| ||| || ||| | ||||| |||||| | ||| || |||||||||| Sbjct 292924 GCGGACGGTCTCACG-GCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACT 292982 Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991 || || | || || | || || |||||| ||||||||||| |||| || Sbjct 292983 CGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGC 293042 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 || | || ||| | | ||||||||| || || |||||||| || | ||| ||||| | Sbjct 293043 CGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGC 293102 Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 | || || ||| ||| |||||| | || || | || ||||||||| Sbjct 293103 GAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCAAGGAAACTGAAGACGTCGG 293162 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171 ||||||| ||||| | ||||| |||| ||| || || ||||||||||| |||||||| | Sbjct 293163 CGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAA 293222 Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTT-AGAGTGGCC 245229 | | | | || | |||| ||| ||| || | || | | |||||| ||| ||| Sbjct 293223 CGTAGCGCGC-AGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTAGT-GCC 293280 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTA 245285 ||||||||| |||||| || || | | || ||| | || |||| || | Sbjct 293281 GTTGGTGCCAGCAATGTAGCTACCAGTGGCAC---GGATGC-GGTGAACATTGAGACCGA 293336 Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345 || || ||| ||||||||| | ||||||| |||||| |||||| || || || | Sbjct 293337 TGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGA 293396 Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405 |||| ||| |||||||| || || ||||| || | || ||| ||||||||| | | | Sbjct 293397 TGCTATCCTCCTTCATGTCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGGGGTTCCAG 293456 Query 245406 AGTTGAACAGAG 245417 ||||||||||| Sbjct 293457 CGTTGAACAGAG 293468 >seq101 Length=66550 Score = 132 bits (146), Expect = 9e-26 Identities = 258/381 (68%), Gaps = 0/381 (0%) Strand=Plus/Minus Query 244766 CCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCC 244825 || ||||||| || ||| |||| ||||||||||||||||||| |||| | ||||| Sbjct 6742 CCGAGGTGCTTCTGGTTGCTCTTGACGTTGCAGGCGTCCTTGTACAGCACGCTTGGCCCG 6683 Query 244826 CCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTG 244885 || ||||| | ||| ||| ||| ||| || |||| ||||||| ||| | Sbjct 6682 CCCGTCTCCATCTGCATCTCGACCACGGCCGACCACAGTGCCCTCGCCTTGAGCGTGCGC 6623 Query 244886 CGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACC 244945 || | |||| ||||||| | ||| || || ||||||||| | || Sbjct 6622 CGGCCGCGGCCCGTCCCCTCGTACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTAGCAG 6563 Query 244946 TCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACC 245005 ||| | || ||||| ||| ||||||||||| || |||| |||||| | | | |||| Sbjct 6562 TCGACGAGCCCGGGACACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCGACC 6503 Query 245006 CTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCG 245065 | ||||||| ||||| || | ||| || || | | ||||| | | || | |||| Sbjct 6502 CGGCGCATGAACAGGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCCGCAGCTCA 6443 Query 245066 TCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCC 245125 ||| ||| | | | ||| | | ||||||||||| ||| ||||||| |||||| Sbjct 6442 TCCTTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACATCGGCGTGCCACGGCTCC 6383 Query 245126 ATGTAGACAGCGAGGGCGCCG 245146 | |||||| ||||| |||| Sbjct 6382 AGGTAGACGACGAGGCTGCCG 6362 >seq666 Length=114793 Score = 98.7 bits (108), Expect = 2e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 242943 ATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTGCTCAAC 243002 ||| | ||||||||| | ||||| |||||||| |||||||||||| |||||||| | | Sbjct 97750 ATGCGTTTCCCGGACCGCACCACGCCGATCGGCCAGATGATCAACGCGTACCTGACCGGC 97691 Query 243003 AAGAGCGATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGATGGGAAGCC 243062 |||||| | ||| || |||||| | || || || ||||| || || || |||||||| Sbjct 97690 GCGAGCGAGCAGGAAGACCACGTCATCCATCTACTCTTCTCAGCAAATCGTTGGGAAGCT 97631 Query 243063 GC 243064 || Sbjct 97630 GC 97629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944331007857440