Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq664 105 8e-18 seq13 93.3 5e-14 >seq664 Length=348155 Score = 105 bits (116), Expect = 8e-18 Identities = 1030/1658 (62%), Gaps = 35/1658 (2%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| || || ||||| | |||||||||||||| || |||||||| | Sbjct 291825 TGAACTGAATTGGCGCAGCGGCGGCCTGCGTACGGAGGTAGTACATGCCAGTCTTGAGAC 291884 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 | |||||||| || | |||||||| | | |||| | || || || |||| Sbjct 291885 CGAGCTTCCAGCCAGCAAAGTGCATCGACGTGATCTTGCCCATCGTAGGGTCTTTCATGT 291944 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || ||| | |||||| || || |||||| || ||||| || ||||| | | | Sbjct 291945 GGATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCAGCCATCTGGACGA 292004 Query 113745 CATCCTTCATCTTGATT--TCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 113802 | | | || ||||| || || ||||||| ||| || || || || || Sbjct 292005 --TGGTGCGCTGAGAAAGCTCCCAGACCGTCTTGTAGAGCGCCTTGATGTCGTCGGGAAT 292062 Query 113803 ATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGA 113862 | ||| | |||||||| || | || ||| | | |||||| | | || Sbjct 292063 GTTGGGGATCTGCTGGATGGAACCGTTGGAAGCGATGATGCGGTTCTTCATCTGATCAGA 292122 Query 113863 CCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACC 113922 ||| || || | | | |||| | ||| ||||| || |||||| || Sbjct 292123 CCACAGGCCGAGGTCGACCAAGTCCTTGAGGAGCCAGGGGTTGACGACCTGAAACTCGCC 292182 Query 113923 CGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 113981 || || || | ||| ||||| || | |||||| ||||| || ||||| ||| | Sbjct 292183 AGCCAGCACACGGCG-AGAGTAGATGTTCGACGTGTACGGCTCGAAACACTCGTTGAAGC 292241 Query 113982 CCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGAC 114041 | | ||| || ||| ||||| |||||||||||||| | ||| || ||| |||| || Sbjct 292242 CGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGAGAGTTGCGGATAC 292301 Query 114042 CCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 114101 | | | ||| |||| | | ||||||||| | || | ||| ||| Sbjct 292302 CGTGCTGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCAA---AGGTCGGTCGGTGCCT 292358 Query 114102 G---CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGT 114158 |||||| || |||| ||||| || || ||||| || |||| || ||||||| Sbjct 292359 TGTTCCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGGACTGCCCTGGAAGGTCTCGT 292418 Query 114159 ATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTG 114215 | || || | | || || | || ||| || || || ||| || || || | Sbjct 292419 AGGGACCATGGAGCTTGGCAAGATCAATCGAG---GCAGTGATGGATGCATGGTAGATGG 292475 Query 114216 TCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACA 114275 |||| ||||| | || | |||||||||| |||||| || | | || Sbjct 292476 TCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCGGGGGAATCGAAAGGCATGCGAAGAG 292535 Query 114276 AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 114335 | || |||| || ||||| | |||||| | | || ||||| || | ||| || Sbjct 292536 CCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGATGGGGCGGTGACGCATGTTGC 292595 Query 114336 ACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 114392 ||||| || ||| ||| || || || | ||||| | | | || | || | Sbjct 292596 TCTTTCTGGC---CTCGGGCACCGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCT 292652 Query 114393 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTCTTCA 114451 | || |||| || | || |||||||| | | | || | || || |||| | Sbjct 292653 TCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCGT-TCTCAACG 292711 Query 114452 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 114511 | ||| | | || || || | || |||| || || |||| | |||||| || Sbjct 292712 TCGACGAAGGTCGGGAGAGCCAGCGAGGCCAAGTTGCAGACAGCGACCTCATCGGGGGCA 292771 Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 |||||||| | || || || | || || || || || || | ||||||||| Sbjct 292772 GTGTACTCGACGATCTCGCAGCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGG 292831 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631 || ||| ||| || ||||||||| |||||| | || | || ||||| ||| Sbjct 292832 TTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGACCTGG 292891 Query 114632 GACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC 114690 | || |||||| || | ||| | | || | | || || || | | | || ||||| Sbjct 292892 GCCTCGAGAATGGCGTACCAAAGCTTCTGAGCGCGG-ACGGTCTCACGGCCGCGACCCTC 292950 Query 114691 CTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 114750 || |||||||| ||| || || || ||||| || || | |||| ||||| || Sbjct 292951 CTTCTCGTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGG 293010 Query 114751 TGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAG 114810 || | ||||| | ||| | ||| || || ||| ||||| ||||||||||| Sbjct 293011 GCACTCGTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAG 293070 Query 114811 GTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 114870 || || ||||||||||| |||| || || ||| || |||| || | || || || Sbjct 293071 ATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTT 293130 Query 114871 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 114930 || | || | || | || || |||||||| || || ||||| | |||| Sbjct 293131 CTTGCGAAGATCAAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAA 293190 Query 114931 TGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCG 114987 | ||| ||| ||| |||||| || || | ||| ||| || | ||||| Sbjct 293191 GGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCG 293250 Query 114988 AAGCATTGGAATGATACCATCAGATTG-GCCATTTGTCCCCCGAAT-ACGAGACTTATTG 115045 |||||| ||||| | || | | | | ||| || || || ||| | || | || Sbjct 293251 AAGCATGGGAATCAAGCCGT-TGCTAGTGCCGTTGGTGCCAGCAATGTAGCTAC-CAGTG 293308 Query 115046 GCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 115105 || | || || | | | ||| || || || || ||| ||||| ||||| Sbjct 293309 GCACGGATGCGGTGAACATTGAGACCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAG 293368 Query 115106 TCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAG 115165 | |||| || ||||||| |||||||| || |||| | |||| |||||||| Sbjct 293369 GTCTTGAGGGTGTCGTAGATACCGTCGATGCTATCCTCCTTCATGTCGATGAGGAAGCAA 293428 Query 115166 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 115203 || || || ||| | || || ||||||||||| || Sbjct 293429 GACGCCAACTGAGGCTTGGGGGTTCCAGCGTTGAACAG 293466 >seq13 Length=394191 Score = 93.3 bits (102), Expect = 5e-14 Identities = 196/284 (69%), Gaps = 10/284 (4%) Strand=Plus/Plus Query 10957 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGG-TTGATTTTCACGGGCAA 11015 ||| |||| |||||| |||||||||||||||| ||| || || || | ||| || ||| Sbjct 238139 CTTTCCGATGGCGTCGATTTCATCGATGAAAATGATGCAAGGCGTGCTCTTC-CGCGCAG 238197 Query 11016 CTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGG 11075 | || | ||| || |||||| | ||| ||||| |||||||| ||||| || | || Sbjct 238198 TGGCGAACAGATCGCGTACTCTCGAAGGACCAACACCGACAAACATCTCCACGAACTCGG 238257 Query 11076 --CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAG 11133 | || | ||| | || ||| || ||| |||||||| || |||| || ||||| Sbjct 238258 AACCGCTG-ACACT-GAAGAATGGCACGCCAGATTCACCGGCAGTGGCCTTTGCAAGGAG 238315 Query 11134 GGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA-- 11191 ||||| || || || || || | |||| || ||||| ||||| | |||||| Sbjct 238316 CGTCTTACCGGTACCGGGAGGACCAGAAAGAATAGCGCCACGCGGGATTTTCGCACCAAG 238375 Query 11192 CTTCCAAAGTAGCGCTCAGGTTGTTTAAGGAAGTCCACGATTTC 11235 |||| |||| |||| | ||| |||||| |||| ||| Sbjct 238376 CTTC--TGGTAGATGCCAGGCTCTTTCAGGAAGCTGACGAATTC 238417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597348417957520