Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq16 132 5e-26 seq663 89.7 6e-13 >seq16 Length=352857 Score = 132 bits (146), Expect = 5e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| |||| || ||||||||| || ||||| |||| || || ||| | Sbjct 17418 ACGAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGCCC 17359 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || ||||||||||||||||| ||||| |||||||| || | || | | |||||| Sbjct 17358 GTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTT 17299 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| | || | | ||| | | | ||||||| ||||| || |||| ||||| Sbjct 17298 GTCC-TGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACCTCGAGCGTGA 17240 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || || || || ||||| || ||||| ||||| Sbjct 17239 TAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCAT 17203 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| |||| |||||| || |||||| ||||| ||||| || | || || || | Sbjct 17190 ACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCC 17131 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || ||||||||||| ||||| || || ||||||||||| | || | || |||||| Sbjct 17130 GTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTT 17071 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 ||| ||| || || | ||| | | | |||||| || || || || | |||| Sbjct 17070 GTCTTGGATCTTGGACTTCA-CGTTGTCGATCGTGTCCGATGACTCGACTTCCAAGGTGA 17012 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| ||||| || || ||||| || ||||||||||| Sbjct 17011 TGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 16975 >seq663 Length=530868 Score = 89.7 bits (98), Expect = 6e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || | ||| || || | || || |||||||| || ||||| | Sbjct 493144 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 493085 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 493084 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 493025 Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198 | | ||||| || || || |||| |||||||| |||||||| || ||||| || | Sbjct 493024 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 492965 Query 42199 AG 42200 || Sbjct 492964 AG 492963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543208087628960