Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq664 277 2e-69 >seq664 Length=348155 Score = 277 bits (306), Expect = 2e-69 Identities = 511/737 (69%), Gaps = 12/737 (2%) Strand=Plus/Minus Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAA 93962 ||||||||||| || ||||| ||| ||| || | || || ||||| || ||| | || Sbjct 293466 CTGTTCAACGCTGGAACCCCCAAGCCTCAGTTGGCGTCTTGCTTCCTCATCGAC-ATGAA 293408 Query 93963 GGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATA 94022 || || |||| ||| || | ||||| ||||||| ||| || | ||||| || Sbjct 293407 GGAGGATAGCATCGACGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGAC 293348 Query 94023 CGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGG 94082 ||| || || ||||| ||| ||| ||| | | ||||||| ||| |||||| || Sbjct 293347 CGCTGGAGGCATCGGTCTCAATGTTCACCGCATCCGTGCCACTGGTAGCTACATTGCTGG 293288 Query 94083 TACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCG 94142 ||||| ||||| ||||||| | | || ||||| || |||| ||||||| | ||||| Sbjct 293287 CACCAACGGCACTAGCAACGGCTTGATTCCCATGCTTCGCGTCTACAACAACACTGCGCG 293228 Query 94143 CTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTG 94202 |||||| ||||||||||| | | | |||| | ||||| |||| |||||||| || Sbjct 293227 CTACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTCGAGCCATG 293168 Query 94203 GCACGCGGACGTG--CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260 |||||| ||||| ||| |||| | || || || |||||||||||||| || | Sbjct 293167 GCACGCCGACGTCTTCAG--TTTCCTTGATCTTCGCAAGAACCACGGCAAGGAGGAAGTC 293110 Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320 |||| | ||||| ||||||||||||||| | || || || || |||||||| |||||| Sbjct 293109 CGGGCTCGCGACCTGTTCTACGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAG 293050 Query 94321 AAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGT 94380 | ||| | |||||| || | || ||||| || || || || ||| | || |||| | Sbjct 293049 CAGAACGGCACCTGGACCCTCATGTGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTAT 292990 Query 94381 GGA-TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCAGGAAGG 94438 ||| || | || || | | || | | ||||| | |||| | |||| | || Sbjct 292989 GGAGACGAG-TTCGAGGCTCTTTACGAGCAGTACGAGAAGGAGGGTCGCGGCC-GTGAGA 292932 Query 94439 TTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGC 94498 | ||| |||||| ||| | || | || | ||||| ||||| |||| | Sbjct 292931 CCGTCCGCGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGGTCGAGACCGGTAACC 292872 Query 94499 CCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTG 94557 ||| ||| ||| |||||| | ||| |||| |||| |||||| || |||| || | Sbjct 292871 CCTTCATGCTGTACAAGGATCACTG-CAACCGCAAGAGCAACCAAAAGAACCTTGGTACG 292813 Query 94558 ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCT 94617 ||| ||||| || || ||| |||||| |||||||| ||| | || || ||| | ||| Sbjct 292812 ATCCGCAGCTCCAACCTTTGCTGCGAGATCGTCGAGTACACTGCCCCCGATGAGGTCGCT 292753 Query 94618 GTGTGTAACCTGGGCTC 94634 || || ||| ||| ||| Sbjct 292752 GTCTGCAACTTGGCCTC 292736 Score = 125 bits (138), Expect = 7e-24 Identities = 203/287 (71%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | ||||| || || ||||||||||| ||||| || |||||||| ||| |||| Sbjct 292293 AACTCTCTGCTCGTCGCACCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAAC 292234 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| || | ||| || ||| | ||| | || ||||| || || || || Sbjct 292233 GAGTGTTTCGAGCCGTACACGTCGAACATCTACTCTCGCCGTGTGCTGGCTGGCGAGTTT 292174 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGA-CGTCTCTGGGTGTGTGGGGTGACAA 95267 | ||| ||||| ||||| |||| || || | || || ||||| ||| | Sbjct 292173 CAGGTCGTCAACCCCTGGCTCCTCAAGGACTTGGTCGAC-CTCGGCCTGTGGTCTGATCA 292115 Query 95268 GGTCAAGAACCAACTGCTACGCG-CCAACGGCTCCGTCCAGAACATCCCGCAAATACCGG 95326 | | ||||||| | | ||| ||||||| ||| ||||| | ||||| | || || | Sbjct 292114 GATGAAGAACCGCATCAT-CGCTTCCAACGGTTCCATCCAGCAGATCCCCAACATTCCCG 292056 Query 95327 AGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | ||||||||||||||||||||||| || |||||| | | |||||| Sbjct 292055 ACGACATCAAGGCGCTCTACAAGACGGTCTGGGAGCTTTCTCAGCGC 292009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718908276240