Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq664 194 2e-44 seq204 178 1e-39 seq101 150 2e-31 seq16 113 4e-20 >seq664 Length=348155 Score = 194 bits (214), Expect = 2e-44 Identities = 814/1261 (65%), Gaps = 33/1261 (3%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || ||||||||||| |||| ||| || | | || | || ||| | | Sbjct 292161 GGTTGACGACCTGAAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACG 292220 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || || | ||||| ||| || || ||| || | ||||| |||||| || | Sbjct 292221 GCTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGA 292280 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCC-TGCCAATCC 153206 | | || ||| || || | |||||| ||| || |||||| ||| | ||| ||| Sbjct 292281 CGAGCAGAGAGTTGCGGATACCGTGCTGAGCAATCTCAGCCTTCA-CGCTGTCCCAGTCC 292339 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 || || | | ||||| | |||||||||||||||||| | | || || ||| ||| Sbjct 292340 CAAAGGTCGGTCGGTGCCTTGTTCCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGGA 292399 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTC-GAG 153325 ||||| || || |||| || | | | | ||| || || | | || | || Sbjct 292400 CTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCA-ATCGAGGCAGTGAT 292458 Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCC--GCTTCTTCGCTC 153383 | ||| ||| ||||| ||| || || | ||||| | || || || | Sbjct 292459 GGATGCATGGTAGATGGTCTCGAAAATCTGGATGTTGAG--CTGCTTGGCCTCGGGGGAA 292516 Query 153384 TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 ||| | |||||||| || || ||||| ||||| ||||| | || ||| || ||||| Sbjct 292517 TCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGATG 292576 Query 153444 GGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCT-ATGGGATAGTGATTGCGATCGAT 153502 || || || | |||||| || || |||| | || ||||| ||| ||||| Sbjct 292577 GGGCGGTGACGCATGTTGCTCTTTCTGGC-CTCGGGCACCGGGTAGTGGTTGATGTCGAT 292635 Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA 153562 || ||||| | ||| ||| | ||| | || | | | | ||| |||| ||| || || Sbjct 292636 GATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTA 292695 Query 153563 GGT-CATTTCGTCGACGCGTACGCA--TCGATTCACGGCAATAGACGCCAGATTACAGAC 153619 | | ||| || ||| ||| | ||| | || | || |||| || ||||| Sbjct 292696 GACACCGTTC-TCAACGTCGACGAAGGTCGGGAGA--GCCAGCGAGGCCAAGTTGCAGAC 292752 Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTAT 153679 || ||| |||| | | |||||| ||||||||| ||| |||||| || || Sbjct 292753 AGCGACCTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGAGCTGCGGAT 292812 Query 153680 GACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 || | || | || ||||| ||||| ||||| || ||| | |||||| | || Sbjct 292813 CGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGG 292872 Query 153740 TCCGCCGGTCTCGACTTGCGTTTCGACGATAA---ACCTATGCAGGTCCTGCGCTCGCAC 153796 ||||||||||| || | |||| || ||| | || | ||| || || || Sbjct 292873 GTTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAAAGC---TTCTGAGCGCGGAC 292929 Query 153797 CCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCC 153856 || || ||| ||||| ||||||| ||||||| || ||| |||||||| || Sbjct 292930 GGTCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACTCGTCTCC 292989 Query 153857 GTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGT-CGG 153915 || || || || || || |||| | || ||||| || | ||| | ||| | | Sbjct 292990 ATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGCCGTTCTG 293049 Query 153916 CGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCT 153975 | | ||| ||| |||||| ||||| || | |||||| ||||| | |||||||| ||| Sbjct 293050 C-TCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCC 293108 Query 153976 TGCAATCCTCCGCGCCCATGTTGCGTTTC--AGATTGAGCACGCTATAGATGTCGGCGTG 154033 | |||||| ||| ||| || | |||| || | || ||| ||||||||| Sbjct 293109 GGACTTCCTCCTTGCCGTGGTTC--TTGCGAAGATCAAGGAAACTGAAGACGTCGGCGTG 293166 Query 154034 CCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCGACGTG 154090 ||| || || | ||||| ||| | |||||| |||||| || ||||| || |||| Sbjct 293167 CCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTA 293226 Query 154091 GCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCG-GTGCCGTTGG 154149 |||| | | |||||| ||||||| | |||||| || |||| |||| |||||||||| Sbjct 293227 GCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCG-TTGCTAGTGCCGTTGG 293285 Query 154150 TCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGC 154209 | | || | ||| || ||| || | | || || || | || ||||| || Sbjct 293286 TGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGACCGATGCCTCCAG 293345 Query 154210 CGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGT 154269 || ||| || || |||||| || || |||||| |||||||||||||| | Sbjct 293346 CGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATGCTATCCT 293405 Query 154270 C 154270 | Sbjct 293406 C 293406 >seq204 Length=141573 Score = 178 bits (196), Expect = 1e-39 Identities = 307/440 (70%), Gaps = 21/440 (5%) Strand=Plus/Plus Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466 ||||||||| |||||||| | || || |||| ||| ||| ||||||| | | Sbjct 65783 GCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTC 65842 Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526 || | | || | |||||||| || || ||| ||||||| | || || || || || Sbjct 65843 AAGAAGCGCGGTCTTATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAG 65902 Query 52527 GGACTGCACACGGACTTTGCGTGCCT-CTACTACAAGACGCGCGTGACCGAAAAATTGGA 52585 || ||||||| |||||||| ||||| || | | ||| || | || | || Sbjct 65903 GGCATGCACACCGACTTTGCCTGCCTGCTGTT------CTCGC---AC--ATCAAGTCGA 65951 Query 52586 TTCGGA--CACGATCCTG-----AGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGT 52638 | | | ||| ||| || || ||| ||||| || | |||||| ||||||| Sbjct 65952 AGCCCAGCCCCGAGGCTGTTGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGT 66011 Query 52639 TTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGT 52698 | | |||| |||||||| |||| || || |||||||| || | ||||||| ||| Sbjct 66012 TCCTGACGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTGCCAGT 66071 Query 52699 ACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAAC 52757 |||||||||| || ||||| || ||| ||||| |||| |||| | | ||||||| |||| Sbjct 66072 ACATCGAGTTCGTCGCGGACCGCCTGCTGGTGGCGCTC-GGCAACAAGAAGTACTACAAC 66130 Query 52758 GCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTC 52817 || ||| || || || || ||| | ||||||||||| |||||||||||||| ||| Sbjct 66131 GCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGTGGCAAGACCAACTTCTTC 66190 Query 52818 GAGAAGCGAGTCGGCGAGTA 52837 |||||||| || || || || Sbjct 66191 GAGAAGCGTGTTGGTGACTA 66210 >seq101 Length=66550 Score = 150 bits (166), Expect = 2e-31 Identities = 313/459 (68%), Gaps = 18/459 (4%) Strand=Plus/Minus Query 153695 CTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGAC 153754 ||| ||||| ||| ||||| ||||| ||| | |||| | || ||||| ||||| | Sbjct 6731 CTGGTTGCTCTTGACGTTGCAGGCGTCCTTGTACAGCACGCTTGGCCCGCCCGTCTCCAT 6672 Query 153755 TTGCGTTTCGACGATAAACCTATGCAGGTCCTGCGC-TCGCACCCGCTGCCGATAGCGGC 153813 ||| | ||||| | | ||| || ||| | | | || |||| ||||| Sbjct 6671 CTGCATCTCGACCACGGCCGACCACAGTGCCCTCGCCTTGAGCGTGC-GCCGGCCGCGGC 6613 Query 153814 CCTCGCTCTCGTATCGCTCGTACAGTCGC-TCAAACTCGTCGCCGTAGCAGTCGGCGAGG 153872 || | |||||| ||||||| || ||| || |||||| | ||||||||||| |||| Sbjct 6612 CCGTCCCCTCGTACTGCTCGTAGAG-CGCGTCGAACTCGCCCGCGTAGCAGTCGACGAGC 6554 Query 153873 CCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATG 153932 |||||||||| ||| |||||||||| ||| |||| || ||| || |||||| Sbjct 6553 CCGGGACACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCGACCCGGCGCATG 6494 Query 153933 AACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAA-TCCTCCGCGCC 153991 ||||| ||||||||||| |||||||| |||||||| ||| ||| || ||| ||| Sbjct 6493 AACAGGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCC-GCAGCTCATCCTTGCC 6435 Query 153992 CATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGAC 154051 | |||| ||| ||||| | | | ||| ||||||||||| || || | |||||| Sbjct 6434 GCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACATCGGCGTGCCACGGCTCCAGGTAGAC 6375 Query 154052 GGCCAGGGCACCTTTACGCTTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGAC 154111 | | ||| || ||| | ||| || | || |||| | ||||||||| Sbjct 6374 GACGAGGCTGCC-----GCTGGCGCCCCCGAGCCGCGCGGCG-------TCGTTGAAGAC 6327 Query 154112 GCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT 154150 ||||| |||||| | | ||| | ||||| |||| ||| Sbjct 6326 GCGCAGCATGGGGCCGATGCCCTTGGCGGTCCCGTCGGT 6288 >seq16 Length=352857 Score = 113 bits (124), Expect = 4e-20 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | | ||||||||||| ||||||||||| Sbjct 17429 CCACCACGCAGACGAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAG 17370 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| |||||| || || ||||| | |||| |||||||| || ||||| || Sbjct 17369 AGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGG 17310 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || | || | ||| || | ||||||| || || | Sbjct 17309 ATACCCTCCTTGTC-CTGAATCTTGCTCTTCACGTTG-TCGATCGTGTCGGAAGATTCAA 17252 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||||| ||| | || || |||||||| || || || || ||||||||| Sbjct 17251 CCTCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCATG 17202 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||||| || | ||| | | |||||||| |||||||||||||| Sbjct 17202 GCCACCGCGCAGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGA 17143 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| |||||| || || ||||| | |||| |||||||| |||||||| || Sbjct 17142 GAGGGTACGGCCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGG 17083 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | ||||| | ||||| || Sbjct 17082 GATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCGAC 17023 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || || || || || || || ||||| Sbjct 17022 TTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 16975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496258094923680