Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq13 87.8 2e-12 >seq13 Length=394191 Score = 87.8 bits (96), Expect = 2e-12 Identities = 166/238 (70%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 12872 CTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT-TGATTTTCACGGGCAA 12930 ||| |||| |||||| ||||| || ||||||| ||| || || || | ||| || ||| Sbjct 238139 CTTTCCGATGGCGTCGATTTCATCGATGAAAATGATGCAAGGCGTGCTCTTC-CGCGCAG 238197 Query 12931 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 12990 | || | ||| || |||||| | ||| ||||| |||||||||||||| || | || Sbjct 238198 TGGCGAACAGATCGCGTACTCTCGAAGGACCAACACCGACAAACATCTCCACGAACTCGG 238257 Query 12991 --CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAG 13048 | || | ||| | || ||| || ||| |||||||| || |||| || ||||| Sbjct 238258 AACCGCTG-ACACT-GAAGAATGGCACGCCAGATTCACCGGCAGTGGCCTTTGCAAGGAG 238315 Query 13049 GGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 13106 ||||| || || || || || | |||| || ||||| ||||| | |||||| Sbjct 238316 CGTCTTACCGGTACCGGGAGGACCAGAAAGAATAGCGCCACGCGGGATTTTCGCACCA 238373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613501877825040