Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq204 154 2e-32 seq664 132 8e-26 >seq204 Length=141573 Score = 154 bits (170), Expect = 2e-32 Identities = 287/418 (69%), Gaps = 5/418 (1%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| | || || |||||||| |||| ||||| Sbjct 66196 CTTCTCGAAGAAGTTGGTCTTGCCACTGAGCGAAATGTTCTCCATGAAGTCGAAGGGGTT 66137 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| ||| |||| ||||| ||| |||||| | ||| || || || || Sbjct 66136 GGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACCAGCAGGCGGTCCGCGACGAACTC 66077 Query 159769 GATGTAGCTACACATCTGC-TCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 |||||| ||||| || | || || || || || || ||||| ||||| |||| Sbjct 66076 GATGTACTGGCACATGAGCGTGGCA-TTCATGCCGAGAAGAGCGACGGGCAGCGCATCCG 66018 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887 ||| ||||||||||| || ||||| || ||| | | ||| | ||| ||| | Sbjct 66017 TCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATCCTCTCAACAGCCTCGGGGC 65958 Query 159888 CCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCT 159947 ||||| | | || || | ||||| ||||| ||||||||| ||||| |||| Sbjct 65957 TGGGCTT---CGACTTGATGTGCGAGAACAGCAGGCAGGCAAAGTCGGTGTGCATGCCCT 65901 Query 159948 CGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGA 160007 | || || || |||| ||||||||| | | |||| || ||||| | || ||| |||| Sbjct 65900 CATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGACCGGGCATAAGACCGCGCTTCTTGA 65841 Query 160008 GCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||| || |||| || || | ||||| || ||||| ||||| ||||| || || || Sbjct 65840 GCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGATACCCTCGACGGCGGCGAAGGC 65783 >seq664 Length=348155 Score = 132 bits (146), Expect = 8e-26 Identities = 334/496 (67%), Gaps = 10/496 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACAT 203895 || ||| || ||||||||||| |||| || |||| ||||||| | | || |||||||| Sbjct 291814 CTGGTCGACAGTGAACTGAATTGGCG--CAGCGGC-GGCCTGCGTACGGAGGTAGTACAT 291870 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||| ||||| || || || ||| || | |||||| || | | |||| || | Sbjct 291871 GCCAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATCGACGTGATCTTGCCCATCGT 291930 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGC 204015 ||||| |||||| ||||| || || ||| ||||| ||||| | ||||||| || Sbjct 291931 AGGGTCTTTCATGTGGATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCCCGATCGGC 291990 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGG 204074 ||||| | || ||||| ||| |||| |||||| ||||||||| | | || || || Sbjct 291991 AGCCATCTGGACGATGGTGCGCTGAGAAAGCTCCCAGACCGTCTTGTAGAGCGCCT-TGA 292049 Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 ||| | || | | | | | || ||| || |||||| || || | | || Sbjct 292050 TGTCGTCGGGAATGT-TGGGGATCTGCTGGATGGAACCGTTGGAAGCGATGATGCGGTTC 292108 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || ||| || ||||| ||| | || || ||| | || |||||||| | Sbjct 292109 TTCATCTGATCAGACCACAGGCCGAGGTCGACCAAGTCCTTGAGGAGCCAGGGGTTGACG 292168 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | |||||| || || | |||||| | || | | | | ||| ||| | || ||||| Sbjct 292169 ACCTGAAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGCTCGAAA 292228 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||||||| ||||| |||||| ||| ||| ||||||||||| || | |||||| Sbjct 292229 CACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGA 292288 Query 204314 GAGTTGCGCACACCGT 204329 |||||||| | ||||| Sbjct 292289 GAGTTGCGGATACCGT 292304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795148302028640