Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq204 279 5e-70 seq16 140 3e-28 seq663 127 2e-24 seq235 86.0 6e-12 >seq204 Length=141573 Score = 279 bits (308), Expect = 5e-70 Identities = 572/850 (67%), Gaps = 74/850 (9%) Strand=Plus/Minus Query 132655 GAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATC 132711 |||||| | ||| || || |||||||||| | |||||||| ||| | |||||| | Sbjct 66165 GAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGC 66106 Query 132712 AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATT 132770 | || ||||| | ||| || |||||||||||||| || ||||| | | ||| | Sbjct 66105 G---CCACCAGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTC 66049 Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGC 132830 | | || || ||| || |||||||| || || || || | |||||| |||| || Sbjct 66048 ATG-CCGAGAAGAGCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGC 65990 Query 132831 GTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATG--CTTGAAC 132888 ||| ||| ||| | ||| | | | ||| ||| || || ||| | |||| Sbjct 65989 CTCGATGATGATCCTCTCAACAGCCTCGGGGCTGGGC--TTCGACTTGATGTGCGAGAAC 65932 Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948 | || ||| ||||||||| |||| |||||| || | ||||||||| |||||| ||| Sbjct 65931 AGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAG 65872 Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 || | |||||||| || ||||| || |||||||| || |||| |||||| ||| Sbjct 65871 GTGAGACCGGGCATAAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTG 65812 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068 ||||||| ||||||||||| ||||| || | ||| ||| | || || | | ||| Sbjct 65811 AAGAAGATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCAAAGGTCGAGTTCTTG 65752 Query 133069 CTGGCGATCCAGCGCAGCGCCCATTCGGCCTT----TT-----------CTTTGACG--- 133110 | |||||||||||| ||||| |||||||| || || ||||| Sbjct 65751 TCGCAGATCCAGCGCAGAGCCCAGTCGGCCTTCCTCTTGATGCAGGGAACTATGACGCGT 65692 Query 133111 ---------------CACGGCATCG--------------------TTTCGATGGCGTTCA 133135 || | ||||| | ||||||||||| | Sbjct 65691 TAGTGATCAATGCTCCATGTCATCGTGTGGGGTGTATCATACTGTTGTCGATGGCGTTGA 65632 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACAT 133193 || | | || | | || | || ||| | ||| |||||||||||| ||| || | Sbjct 65631 AC--AGGTAGGTGCGCTGCTTGGGCTCGCTAATGTACGTGTCGATGAGGAGCGAGTAGGT 65574 Query 133194 TTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCAC 133253 |||||||| | ||||||||| ||| || |||||||| ||||| || |||||| | Sbjct 65573 CTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGAT 65514 Query 133254 CTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGG 133312 ||| || || |||| ||| |||||||| || || ||||| |||||||| || |||| Sbjct 65513 CTGGACCTC-GGAGCTGAAGCGCTCGACGAGGTTCTCGTTCACGATGCCATCCGACGCGG 65455 Query 133313 CGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC---TCCC 133369 |||| ||||| || ||||| |||||| |||||||| |||||| | |||| | || Sbjct 65454 CGAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCC 65395 Query 133370 AGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429 ||||| | ||||||||| || || | |||||| | ||||| || || |||||||| | Sbjct 65394 AGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCAGCAGTCCAGAAAGAAGCCTCGGCCT 65335 Query 133430 TTTTGTACAT 133439 | |||||||| Sbjct 65334 TCTTGTACAT 65325 >seq16 Length=352857 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| ||||||||| | || |||||| | | Sbjct 16975 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGTCATCG 17034 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || |||| ||||| ||||| || ||| | ||||| Sbjct 17035 GACACGATCGACAACG-TGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCA 17093 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | |||||| || |||||||| |||| || |||||| |||||||| Sbjct 17094 GCAGCGTCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAA 17153 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||| || ||||| |||| ||||| |||| |||||| || | || ||| Sbjct 17154 CATTCAGAAGGAGTCGACTTTGCATCTGGTACTGCGTCTGCGCGGTGGC 17202 Score = 129 bits (142), Expect = 6e-25 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || || ||||| |||| || || | || Sbjct 17203 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACGCTCGAGGTTGAATCTTCC 17262 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| || | | | | |||| || || | ||||| ||||| || ||||||| | | Sbjct 17263 GACA-CGATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTAT-CCCGCCGGATC 17320 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || |||||||| |||| |||||| ||| ||||||| Sbjct 17321 AGCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACGCTCTCTGACTACA 17380 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| |||| ||||| |||||||| ||| || | || || Sbjct 17381 ACATCCAAAAGGAGTCGACCCTGCACTTGGTGCTTCGTCTGCGTGGTGG 17429 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 || ||||| ||||||||| | || |||||| || | |||| | | | | | || Sbjct 16771 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAATGTCAAGTCG 16830 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| ||||| || ||| | ||||| ||||| | || | ||| ||||| Sbjct 16831 AAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 16890 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 ||||| || || | || ||||| ||||||||||||||| ||||| |||| || || Sbjct 16891 CAGCTTGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCGACTCTCCA 16949 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| | || |||||| | |||||| | | | |||| | || Sbjct 16486 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACG--TCAA 16543 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| || || || || ||||| | || || ||||| | || | ||| || Sbjct 16544 GAGCAAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCCGG 16603 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || || | |||||||| |||||||||||| || ||||| | || || Sbjct 16604 CAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCT 16663 Query 38444 GCATTTGGTGCTGCG 38458 ||| | || || || Sbjct 16664 TCATCTCGTCCTCCG 16678 >seq663 Length=530868 Score = 127 bits (140), Expect = 2e-24 Identities = 140/183 (77%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| |||||| || | |||| | | Sbjct 492964 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 493023 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | || | | |||| || |||| ||||| ||||| |||||| | ||||| ||||| | Sbjct 493024 GACAATG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCC 493081 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| ||||| ||||| || || | |||||||| ||||||||||||||| | Sbjct 493082 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGA 493141 Query 38431 AGG 38433 ||| Sbjct 493142 AGG 493144 >seq235 Length=704811 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| | ||||| ||||| || || | ||| ||||| ||||| || Sbjct 90087 GACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 90028 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | |||||||| |||||||||||||| ||||| | || || || | |||||| Sbjct 90027 GATGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTG 89968 Query 38457 CGTTTGAGAGGCGGC 38471 || || | || ||| Sbjct 89967 CGCCTGCGTGGTGGC 89953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168461000960