Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq664 105 8e-18 seq13 105 8e-18 >seq664 Length=348155 Score = 105 bits (116), Expect = 8e-18 Identities = 294/448 (66%), Gaps = 5/448 (1%) Strand=Plus/Plus Query 110373 ACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGT 110432 ||| | |||||| || || ||| |||||| |||||| || |||||| | ||| | Sbjct 292816 ACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGTT 292875 Query 110433 ACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTG 110491 ||| || || ||| | || ||||||||| | ||| | | || | | || |||| || Sbjct 292876 ACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAAAGCTTCTGAG-CGCGGACGGTCT 292934 Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551 | || |||| |||| |||||||| ||| | |||| || || | ||| || | Sbjct 292935 CACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCATAAA 292994 Query 110552 CATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAA 110611 |||| | || ||| || || ||| || | ||||| ||| | || || ||| | Sbjct 292995 CATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCGA 293054 Query 110612 CCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCT 110671 | | |||||||| || ||||||||||| | || |||| ||||| || || | | Sbjct 293055 CACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTT 293114 Query 110672 CTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTT 110731 | || | || ||||| ||| || || | || | || || | ||||||||| | Sbjct 293115 CCTCCTTGCCGTGGTTCTTGCGAAGATCAAGGAAACTGAAGACGTCGGCGTGCCATGGCT 293174 Query 110732 CGAGATAGACAGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTG 110788 |||| |||| |||| || ||| ||| || |||||| ||| ||||| || | Sbjct 293175 CGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTAGCGCGCAG 293234 Query 110789 TGGCATTGAAGACCCTGAGCATAGGAAT 110816 || ||| |||| | ||||| ||||| Sbjct 293235 TGTTGTTGTAGACGCGAAGCATGGGAAT 293262 >seq13 Length=394191 Score = 105 bits (116), Expect = 8e-18 Identities = 277/416 (67%), Gaps = 25/416 (6%) Strand=Plus/Plus Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565 || |||||||| || || | ||||| | || |||| ||| | ||| ||| | ||| Sbjct 237969 TCAAAACGACCAGGACGCATAAGAGCCTTGTCGAGAACATCAGGTCTGTTAGTACCAGCA 238028 Query 11566 ATGACTACAA--TGCCAGTCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 | ||| || | ||| || | ||| ||| || ||||| || || |||| |||||| Sbjct 238029 AGGACGACCACTTGC---TCCGAGGTGTTGAACCCATCCATCTCGGTCAGAATCTGGTTC 238085 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACC-------TGCCGAACGCTT--C 11673 | ||| ||| | ||| |||||| |||||| ||| | ||| | Sbjct 238086 AGCGTGCTTTCTCTCTCGTCGTTGCC------ACCACCAAAGCTTTGCTTGGCTCTTGAC 238139 Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 || |||| ||||| || ||||||||||| | ||| || || | | || || Sbjct 238140 TTTCCGATGGCGTCGATTTCATCGATGAAAATGATGCAAGGCGTGCTCTTCCGCGCAGTG 238199 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791 |||| || || ||||| | | | |||||||| || |||||||| ||||| | | Sbjct 238200 GCGAACAGATCGCGTACTCTCGAAGGACCAACACCGACAAACATCTCCACGAACTCGGAA 238259 Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | || | |||||||| ||| || || ||| ||||| || |||| || ||||| | Sbjct 238260 CCGCTG-ACACTGAA-GAATGGCACGCCAGATTCACCGGCAGTGGCCTTTGCAAGGAGCG 238317 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907 ||||||| ||||| || | ||||| |||| |||||||| ||||| || |||||| Sbjct 238318 TCTTACCGGTACCGGGAGGACCAGAAAGAATAGCGCCACGCGGGATTTTCGCACCA 238373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588970890633200