Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq204 91.5 2e-13 >seq204 Length=141573 Score = 91.5 bits (100), Expect = 2e-13 Identities = 276/423 (65%), Gaps = 14/423 (3%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| ||||| |||||||| |||||||||||||| ||| || |||||| ||||| Sbjct 66210 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACTGAGCGAAATGTTCTCCATG 66151 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099 ||||| || || || | ||||| | | | || | | | | || || Sbjct 66150 AAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACC------AGC 66097 Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159 || || |||| || |||| ||||||| | |||| | | ||||| |||| ||| Sbjct 66096 AGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGAAGA 66037 Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219 || || || ||| | |||| | ||||| || || || ||||| | | ||| Sbjct 66036 GCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATC 65977 Query 117220 GCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGT-CTTGAAGAGCTCCACGGCAAA 117278 | | || |||| |||| || || | || | ||| ||| |||||| Sbjct 65976 CTCTCAACAGCCTCGGGGCTGGG-CTTCGACTTGATGTGCGAGAACAGCAGGCAGGCAAA 65918 Query 117279 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCAT 117338 || ||| | |||||||| |||||||| || || || |||||| || || ||||| Sbjct 65917 GTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGACCGGGCAT 65858 Query 117339 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 117398 ||||| |||||||| | ||| | || | | ||| || ||| ||||||||||||||| Sbjct 65857 AAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGATACCCTC 65798 Query 117399 CAC 117401 || Sbjct 65797 GAC 65795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975681916560