Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq664 242 7e-59 seq204 226 5e-54 seq101 104 4e-17 >seq664 Length=348155 Score = 242 bits (268), Expect = 7e-59 Identities = 867/1334 (65%), Gaps = 45/1334 (3%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | ||| || || || | ||||| | | ||| | ||| || ||||| Sbjct 292160 GGGTTGACGACCTGAAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTAC 292219 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| | ||||||| || || ||||| || ||| ||||||||||| || Sbjct 292220 GGCTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCG 292279 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATG--AGGCGCCGAAGCTCTGCCCAGT 213084 || || ||| ||| | | ||||||| | || || | | | ||| | |||||| Sbjct 292280 ACGAGCAGAGAGTTGCGGATACCGTGCTGAGCAATCTCAGCCTTC-ACGCTGT-CCCAGT 292337 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| | | | | ||| | ||| |||||||||||| |||||| |||||| | Sbjct 292338 CCCAAAGGTCGGTC-GGTGC-----CTT---GTTCCACATGTCGTACTGCAGGATGCCCT 292388 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 | || ||||||||| | | |||||| ||||| |||||| || || | Sbjct 292389 GAGAGGCAGGACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCAATCG 292448 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || | || || | ||||||||| || || |||| ||||||||| |||||||| Sbjct 292449 AGGCAGTGATGGATGCATGGTAGATGGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCT 292508 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | ||||| ||| ||||| | |||| |||| || || || | ||| || | Sbjct 292509 CGGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCA 292568 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGC 213384 ||||||| | ||| | || ||| ||| | ||| || ||||| |||| Sbjct 292569 CTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGA 292628 Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444 ||||||||||||||| | ||| | ||| | ||| || | | || | || Sbjct 292629 TGTCGATGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCT--- 292685 Query 213445 GATTGAACACGTAGCCCCCGTCCTGCACAA--ACTCAGGCAGGGCGATGCTG----GCCA 213498 |||| ||||| | |||| || || || ||| ||| || | | |||| Sbjct 292686 ---TGAAGTCGTAGACACCGTTCTCAACGTCGACGAAGGTCGGGAGAGCCAGCGAGGCCA 292742 Query 213499 GGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGC 213558 |||||| || || ||||| | | | | |||||||| | ||||||| ||| |||||| Sbjct 292743 AGTTGCAGACAGCGACCTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGG 292802 Query 213559 TGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAG 213617 || ||||| || || ||||||| ||||| ||| ||| | |||| ||||||||| Sbjct 292803 AGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTT-GCGGTTGCAGTGATCCTTGTAC 292861 Query 213618 AGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTG 213677 |||||| ||||| |||||||| | ||||| | | || || | ||| || | | Sbjct 292862 AGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAAAGCTTCTGA 292921 Query 213678 GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTT 213736 || ||| | || || || || | | ||||||||| ||||| || | | Sbjct 292922 GCGCGGACG----GTCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTC 292977 Query 213737 GAATTCGTGGCCCCAGACC-CTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCC 213795 ||| |||| || | || ||| |||| ||||| || ||| ||||||||| ||| Sbjct 292978 GAACTCGTCTCCATAAACATCTG-CCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCC 293036 Query 213796 AGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAAC 213854 || |||| | ||| ||| | | |||||| || || || | ||| || ||| |||| Sbjct 293037 AGGTGCCGTTCTGCTC-GACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 293095 Query 213855 AGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAG 213914 ||||| | | || || ||| || ||| ||||| ||||| || || ||| Sbjct 293096 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCAAGGAAACTGAAG 293155 Query 213915 ATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCC 213971 | ||| |||||||| ||||| | ||||||||| ||||| ||||| | |||| || ||| Sbjct 293156 ACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 293215 Query 213972 TGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG-A 214030 ||||| || | || ||||| ||| ||| || | ||| | || |||||| | Sbjct 293216 TGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTA 293275 Query 214031 CTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGT--TGCTCATGGAGAGC 214088 || |||||||| || || || || || | ||| | | | || ||| |||| Sbjct 293276 GTG-CCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGA-- 293332 Query 214089 CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCG 214148 || ||||| || ||| ||||||||||||||||||| | | | || || ||| ||| Sbjct 293333 CCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCG 293392 Query 214149 GCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG 214208 | ||||| || || | | || | | |||||| || | ||| ||| ||| | Sbjct 293393 TCGATGCTATCCTCCTTCATGTCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGGGGTT 293452 Query 214209 CCAGAGTTGAAAAG 214222 |||| |||||| || Sbjct 293453 CCAGCGTTGAACAG 293466 >seq204 Length=141573 Score = 226 bits (250), Expect = 5e-54 Identities = 366/521 (70%), Gaps = 19/521 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | ||| |||||||| Sbjct 66214 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACTGAGCGAAATGTTCTC 66155 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||||| | ||| || | | ||| ||| | | ||||| Sbjct 66154 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTT--GCCGAGCGCCACCAGC 66097 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 ||| | ||||||||| |||||||||| | ||||||| ||| |||||||| | || Sbjct 66096 AGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGAAGA 66037 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 | ||||||| || | || || ||||||||||| || | || || || | ||| Sbjct 66036 GCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATC 65977 Query 48077 TGCTTAACG----CGGGACTCTGAGGGTTTG--TTGCGCAGGTGCTTGGCATAGAGCATG 48130 || ||| |||| || || || | ||| | |||| | | |||| | Sbjct 65976 CTCTCAACAGCCTCGGGGCTG---GGCTTCGACTTG---ATGTGCGAGA---ACAGCAGG 65926 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| |||||| ||| || || ||| |||||| ||||||||||| |||| Sbjct 65925 CAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGA 65866 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||| | || | || ||||||||||| || | ||||| ||||| ||||||| Sbjct 65865 CCGGGCATAAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAG 65806 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || ||||| || | || | | | | || | | ||||||||| || Sbjct 65805 ATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCAAAGGTCGAGTTCTTGTCGCAG 65746 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 |||||| || |||||||| |||||| |||||||||| || Sbjct 65745 ATCCAGCGCAGAGCCCAGTCGGCCTTCCTCTTGATGCAGGG 65705 >seq101 Length=66550 Score = 104 bits (114), Expect = 4e-17 Identities = 164/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 213712 CCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCA---GTCCCG 213768 |||||||||| ||||||||| ||| ||| ||| ||| | | ||| | | || | Sbjct 6606 CCTCGTACTGCTCGTAGAGCGCGTCGAACTCG---CCCGCGTAGCAGTCGACGAGCCCGG 6550 Query 213769 GACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACA 213828 |||| || || ||||| || ||||||| ||||| | ||| | ||||||||| Sbjct 6549 GACACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCGACCCGGCGCATGAACA 6490 Query 213829 GGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGT 213888 ||||||| |||||||||||| | |||||| | | || | ||| ||| || | Sbjct 6489 GGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCCGCAGCTCATCCTTGCCGCCGC 6430 Query 213889 TTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGA 213942 | || ||| | || |||||||||| || |||||||||||||||| ||||| Sbjct 6429 TGCGGCCCAGGTTGAGGAAGTCAAAGACATCGGCGTGCCACGGCTCCAGGTAGA 6376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931524718952960