Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq204 91.5 2e-13 seq13 86.0 7e-12 >seq204 Length=141573 Score = 91.5 bits (100), Expect = 2e-13 Identities = 276/423 (65%), Gaps = 14/423 (3%) Strand=Plus/Plus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 || ||||||||||||||| ||| || ||| | | || | ||| | |||||||| ||| Sbjct 65795 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 65854 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAG 65220 || ||||| || || |||||| || || || |||||||| |||||||| | ||| Sbjct 65855 CTTATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAGGGCATGCACACC 65914 Query 65221 GAGTTTGCCGTGGAGCTCTTCAAG-ACTTTGCGTAATAGACCCACTACCGAAACTATCCA 65279 || |||||| ||| ||| | || | || || |||| |||| || | | Sbjct 65915 GACTTTGCCTGCCTGCTGTTCTCGCACATCAAGTCGAAG-CCCAGCCCCGAGGCTGTTGA 65973 Query 65280 CGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATG 65339 ||| | | ||||| || || || ||||| | |||| | ||| || || || Sbjct 65974 GAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCCCGT 66033 Query 65340 TAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCG 65399 ||| |||| ||||| | | |||| | ||||||| |||| || |||| || Sbjct 66034 CGCTCTTCTCGGCATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCGGACCG 66093 Query 65400 TCTCCTCAAACAAGTTGGGGT-GCCACCCA-----TTTGGAACGCGAAGAATCCATTTGA 65453 || || || | | | | || | | | ||||| | || || || || Sbjct 66094 CCTGCT------GGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGA 66147 Query 65454 CTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGA 65513 ||| ||||| |||||| || ||| |||||||||||||| |||||||| ||||| || Sbjct 66148 CTTCATGGAGAACATTTCGCTCAGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 66207 Query 65514 CTA 65516 ||| Sbjct 66208 CTA 66210 >seq13 Length=394191 Score = 86.0 bits (94), Expect = 7e-12 Identities = 219/327 (67%), Gaps = 21/327 (6%) Strand=Plus/Minus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||| || ||||| || ||||| |||| | ||| || ||||| || ||||| || Sbjct 238373 TGGTGCGAAAATCCCGCGTGGCGCTATTCTTTCTGGTCCTCCCGGTACCGGTAAGACGCT 238314 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CA 175392 ||| || |||| || |||||||| || |||||| || |||| || || | | Sbjct 238313 CCTTGCAAAGGCCACTGCCGGTGAATCTGGCGTGCCATTCTTC-AGTG-TCAGCGGTTCC 238256 Query 175393 AACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452 | || |||||||||||||| ||||| ||| | || || |||||||| || | | Sbjct 238255 GAGTTCGTGGAGATGTTTGTCGGTGTTGGTCCTTCGAGAGTACGCGATCTGTTCGCCACT 238196 Query 175453 GCCCGCGAAAATCA-ACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG-C 175510 || || ||| | || || || || | ||||| ||||| || || || | || ||| | Sbjct 238195 GCGCG-GAAGAGCACGCCTTGCATCATTTTCATCGATGAAATCGACGCCATCGGAAAGTC 238137 Query 175511 AA--------CGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAA 175562 || | ||| ||||||| | || |||||||||||| || | || Sbjct 238136 AAGAGCCAAGCAAAGCTTTGGTGGT------GGCAACGACGAGAGAGAAAGCACGCTGAA 238083 Query 175563 TCAACTACTCACCGAGATGGATGGCTT 175589 || | || |||||||||||||| || Sbjct 238082 CCAGATTCTGACCGAGATGGATGGGTT 238056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596564424758720