Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq16 224 1e-53 seq224 210 3e-49 seq663 131 2e-25 seq257 93.3 6e-14 >seq16 Length=352857 Score = 224 bits (248), Expect = 1e-53 Identities = 363/520 (70%), Gaps = 9/520 (2%) Strand=Plus/Plus Query 196364 AACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATT 196423 ||||| | |||||||| ||||| || ||||| || ||||| || || ||||||||||| Sbjct 747 AACAAGTCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCCGCTGTCCAGGCTGCTATC 806 Query 196424 CTCTCAGGTGTTGACAATAAT--AACGTCC----AAGATCTTCTGCTACTTGATGTTGCA 196477 || || || ||||| | | | |||| | || ||||||| || || ||||| Sbjct 807 CTGTC---TGGTGACACTTCTTCCAAGTCCACCAACGAGATTCTGCTGCTCGACGTTGCT 863 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 ||| | ||||| ||| | || || || |||||||| |||||| | || | | ||| Sbjct 864 CCCCTCTCCCTCGGTATCGAGACCGCCGGTGGTGTCATGACTCCTCTCATCAAGCGCAAC 923 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGT 196597 || || || || || |||||| | ||||| || || | ||||| || || || ||| Sbjct 924 ACCACCATCCCTACCAAGAAGTCGGAGGTCTTCTCCACCTTCTCCGACAACCAGCCTGGT 983 Query 196598 GTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGA 196657 || | || || || | || || || || |||| | ||||| ||| |||| || || Sbjct 984 GTCCTCATCCAGGTCTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAATCTGCTCGGC 1043 Query 196658 ACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGC 196717 | ||||| | ||||| || || |||| ||| | |||||||| |||||| | || | Sbjct 1044 AAGTTCGAGCTTACGGGCATCCCCCCTGCGCCCCGCGGTGTTCCCCAGATTGAGGTCACC 1103 Query 196718 TTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAA 196777 ||||| | || || || ||||| | |||||| | ||| || |||| ||||||| Sbjct 1104 TTCGACCTTGATGCCAACGGAATCATGAACGTCTCCGCTCTCGAGAAGGGCACTGGCAAG 1163 Query 196778 TCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGT 196837 | | |||||||| || ||||| |||||||| || || || |||||||| || || ||| Sbjct 1164 ACCAACAAGATTGTCATCACCAACGACAAGGGTCGTCTGTCCAAGGAGGACATCGAGCGT 1223 Query 196838 ATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 ||| || || || || ||||||| || || || |||| Sbjct 1224 ATGCTTGCCGAGGCCGAGAAGTACAAGGCTGAGGATGAGG 1263 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| |||||||| |||||||| ||||||||||| || || Sbjct 17203 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACGCTCGAGGTTGAATCTTCC 17262 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || ||||||||| || ||||| || || || || |||||| Sbjct 17263 GACACGATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCGGATCAG 17322 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || |||||||| ||||| || || || || || ||| |||| |||||| Sbjct 17323 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACGCTCTCTGACTACAAC 17382 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | ||||||||||| || || ||| | || || | || || ||||| Sbjct 17383 ATCCAAAAGGAGTCGACCCTGCACTTGGTGCTTCGTCTGCGTGGTGG 17429 Score = 170 bits (188), Expect = 3e-37 Identities = 177/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || ||||| || || || || |||||| | || || |||| Sbjct 16970 GTGGTATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGT 17029 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| | || ||||||| ||||| ||||| ||||| || || | Sbjct 17030 CATCGGACACGATCGACAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGG 17089 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || || || ||||| ||||| || || || ||||||||| | || | Sbjct 17090 ACCAGCAGCGTCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACT 17149 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| |||| |||||||| ||| | || || || || | || || ||||| Sbjct 17150 ACAACATTCAGAAGGAGTCGACTTTGCATCTGGTACTGCGTCTGCGCGGTGG 17201 Score = 165 bits (182), Expect = 1e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||| ||||| |||||||| ||||| ||||| ||| |||| | Sbjct 16488 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACGTCAAGAGC 16547 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || ||||||||||||||||| || |||||||| || | || || || || || Sbjct 16548 AAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCCGGCAAG 16607 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||||||||| || ||||| | || |||||| |||| |||||||| || || || Sbjct 16608 CAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCTTCAT 16667 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || |||||| Sbjct 16668 CTCGTCCTCCGCCTCCGCGGTGGT 16691 >seq224 Length=463250 Score = 210 bits (232), Expect = 3e-49 Identities = 396/577 (69%), Gaps = 13/577 (2%) Strand=Plus/Minus Query 195416 ACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATC 195475 ||||| | || ||| | | || || ||||||| || ||| || |||||||| | Sbjct 640 ACAGACACCGAGCGTTTGATCGGTGACTCCGCAAAGAACCAGGTCGCCATGAACCCCCAC 581 Query 195476 AATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAA 195535 || || ||||| ||||| ||||| || ||||| |||||||| || | ||||| Sbjct 580 AACACCGTCTTCGACGCCAAGCGCCTGATTGGCCGCAAGTTCAACGACGCCGAGGTCCAG 521 Query 195536 GACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCG--GTGTGGCTGATAAGCCTATGA 195593 | |||||| ||| ||| | | | ||| | || | | ||||| |||||| | | Sbjct 520 GCCGATATGAAGCACTTCCCCT-TCAAGGTCATCGAGAAGGGTGGC----AAGCCTGTCA 466 Query 195594 TTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGG 195653 | | || || || | || ||| |||| || |||| || ||||| || || |||| Sbjct 465 TCCAGGTCGAGTTCAAGGGCGAGGAGAAGACTTTCACTCCTGAGGAAATCTCTTCCATGG 406 Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAG 195713 | ||| ||||||| ||||||||| || || | | | ||| || || || | || | Sbjct 405 TCCTGACCAAGATGAGGGAGACTGCTGAGTCGTACCTCGGTGGCACCGTCAACAACGCTG 346 Query 195714 TTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773 |||| || || || || ||||||| || || || || ||||| || ||||| || | | Sbjct 345 TTGTTACCGTCCCCGCCTACTTCAACGACTCCCAGCGCCAGGCTACCAAGGATGCCGGTC 286 Query 195774 CTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTT 195833 || || || || ||| || | || ||||| || || || || ||||| || || | Sbjct 285 TCATCGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATCGCCT 226 Query 195834 ATGGTCTGGACAAGAACAAGG--AC-GAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 | ||||| |||||||| || || | || || || ||||||| ||||| || | Sbjct 225 ACGGTCTCGACAAGAA---GGCTACTGGTGAGCGCAACGTCATGATCTTCGATCTTGGCG 169 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 ||||||| || ||||| || || |||| ||||| | ||||| ||||| || ||| | | Sbjct 168 GTGGTACTTTCGATGTTTCCCTCCTCACCATTGAGGAAGGTATCTTCGAGGTCAAGTCCA 109 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| ||||||||||| || ||||| || || ||||| Sbjct 108 CTGCCGGTGATACTCACCTGGGTGGCGAGGACTTCGA 72 >seq663 Length=530868 Score = 131 bits (144), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| || || ||||| || || || || |||||||||||||| ||||| || ||||| || Sbjct 492963 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 493022 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| || |||| |||||| || || ||||| |||||||| || || ||||| || || Sbjct 493023 CGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 493082 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || || || || ||||| || ||||| || ||||| | || |||||| | || || Sbjct 493083 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 493142 Query 172050 GG 172051 || Sbjct 493143 GG 493144 >seq257 Length=880677 Score = 93.3 bits (102), Expect = 6e-14 Identities = 184/272 (68%), Gaps = 3/272 (1%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || ||||| ||||||| || || || ||||| || |||||||| | | || Sbjct 414085 ACCGTCCCTGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAGGACGCCGGCTCCATC 414026 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | || ||||| || || || || || || || || || ||| Sbjct 414025 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCCGCTATCGCCTACGGT 413966 Query 195839 CTGGACAAGAACAAGGACGAA---GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| ||| || | || || | |||| ||||| ||||||||| Sbjct 413965 CTCGGCTCCGGCAAGTCCGAGAAGGAGAGGAACGTCCTCATCTACGATCTTGGTGGTGGT 413906 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| || || | || | || || | ||| || ||||| || ||| Sbjct 413905 ACTTTCGATGTCTCCCTCCTGCACATCCAGGGCGGCGTCTTCACCGTCAAGGCCACCGCT 413846 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || ||||| |||||| | || ||||| Sbjct 413845 GGTGACACCCATCTTGGTGGTCAGGACTTCGA 413814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657856693043680