Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq246 214 2e-49 seq204 187 3e-41 seq556 145 9e-29 seq664 125 9e-23 seq312 116 5e-20 seq534 105 8e-17 seq73 95.1 1e-13 seq101 91.5 2e-12 >seq246 Length=526737 Score = 214 bits (236), Expect = 2e-49 Identities = 347/491 (71%), Gaps = 10/491 (2%) Strand=Plus/Minus Query 1852166 GCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCG 1852225 ||||| ||||| | ||| || || || |||||| |||| || | | || ||||||| Sbjct 28794 GCAAAAATCTTCCTCTGATCCACGCCACCGAACTGGACGTCCACACCCAAGTACTGCTCG 28735 Query 1852226 TCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTG-CGGTCCATCTT 1852284 ||||||||||||||||||||||||| || | | ||| ||||||||| | ||| ||| Sbjct 28734 TCGAGGGCCTGCATGAGCGGGTAGATCAGGCCGGACAGCAGCGGGTTGTCCGTCTG-CTT 28676 Query 1852285 GACCACCTGAGCGGCGGC-CTTTTG-CGCCGTGC-CGGTGCGCACG-TGCGCCGCGAGTC 1852340 ||| |||| || |||| || ||| || ||||| ||||| || | ||| | || | Sbjct 28675 GACGACCTCGGCACCGGCTCTCTTGGCGTCGTGCTCGGTGGTCATGGTGCTC----AGGC 28620 Query 1852341 GGTAGAGGTCGAGCGCGTAGGCGCCGCCGCACTGGTACTCGGTGCCGCGCACAAACTCGA 1852400 | ||||| | | |||| ||| |||||||||| | || |||| ||||||| Sbjct 28619 GCAGCAGGTCCATCATGTAGTTTTCGCTCTTCTGGTACTCGCTTCCCAGCACGAACTCGA 28560 Query 1852401 GTCCGCCCAGCGGCACGCCGATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACCAGC 1852460 | | | | | || |||||||| | || |||| | ||||| || ||| ||| | Sbjct 28559 GGCGGTCGACCGACACGCCGACGGCCTTGAGCGACTCGGTGATGACATACTTGTAGTACT 28500 Query 1852461 GGCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCACGT 1852520 | |||| | |||||| || |||| |||| |||||| ||| |||||| | || Sbjct 28499 TGGCGCGGTAGTTGACCAGCTCAATGGGCGCCTTGAGGTTGTCCAGGAAGGCGTGGATGT 28440 Query 1852521 CGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATGG 1852580 |||| | ||||||||||| | ||||| ||||| || || | || | |||| |||| Sbjct 28439 CGGCCAGCAGGATCTTGACATGGCAGCCCGCCTGCAGGAACTGCGCGATCTTGAGCATGG 28380 Query 1852581 GCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATATATGATCAGGG 1852640 ||||||||||||| |||||| ||||||| | |||||||||||| || ||| ||| | Sbjct 28379 GCACAAAGTAGCCGCAGTGCGGCCTGCCCGTGGTCGCCGTGCCCCAGTAGATGCGCAGCG 28320 Query 1852641 GGCGCTCGGCC 1852651 | |||||| || Sbjct 28319 GCCGCTCGCCC 28309 >seq204 Length=141573 Score = 187 bits (206), Expect = 3e-41 Identities = 234/317 (74%), Gaps = 8/317 (3%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| |||||| || Sbjct 66219 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACTGAGCGAAATG 66160 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||||||| ||| | | ||||||| | | Sbjct 66159 TTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACC 66100 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||||||||||||||||||||| ||| |||||||||| Sbjct 66099 AGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGA 66040 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || ||||||| || ||| ||||| |||||||| ||||| ||||||| |||| Sbjct 66039 AGAGCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATG 65980 Query 868931 ATCTGCCTGGGCA-CGTCGGCCGAGGGCTTG---TTGACGAGCATCGTGTAGAGCAGGCA 868986 ||| | | || | |||| |||||| |||| | || | | | |||||||| Sbjct 65979 ATCCTC-TCAACAGCCTCGGGGCTGGGCTTCGACTTGATGTGC---GAGAACAGCAGGCA 65924 Query 868987 GGCAAAGTCGCAGTGCA 869003 |||||||||| ||||| Sbjct 65923 GGCAAAGTCGGTGTGCA 65907 Score = 131 bits (144), Expect = 2e-24 Identities = 181/253 (72%), Gaps = 3/253 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || ||||||||||||||| ||| | |||| | | | Sbjct 65571 CCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCT 65512 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 ||||||| |||| || || | ||||||||| ||||||||| || ||||||| Sbjct 65511 GGACCTCGGAGCTGAAGCGCTCGACGAGGTTCTCGTTCACGATGCCATCCGACGCGGCGA 65452 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA---GCGACACCCAGT 869807 | || || || ||||| ||| ||| ||||||||||||| ||| || ||||| Sbjct 65451 AGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGT 65392 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | | ||| | ||| || | |||||| || ||||||| || ||||||||||| | Sbjct 65391 CGTGGAGGTCCTTGGAGAGATCAATCTCCTCAGCAGTCCAGAAAGAAGCCTCGGCCTTCT 65332 Query 869868 TGTACATCTCCCA 869880 ||||||||| ||| Sbjct 65331 TGTACATCTGCCA 65319 Score = 107 bits (118), Expect = 2e-17 Identities = 127/170 (75%), Gaps = 9/170 (5%) Strand=Plus/Minus Query 869201 TCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAG 869260 |||||| |||| ||| |||||||| || ||||||||||||||||| ||||||| | | Sbjct 65883 TCGTTGGAGAAGGTGAGACCGGGCATAAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCG 65824 Query 869261 AAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAG 869320 || ||| ||| ||||| |||||||||||||| ||| | || || ||| |||||| Sbjct 65823 AAGGAGCCGCTGAAGAAGATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCAAAG 65764 Query 869321 GTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTCGGCCTT 869367 |||||| | ||||| |||||| || |||||||||||||| Sbjct 65763 --GTCGAG----TTCTTGTCGCAGATCCAGCGCAGAGCCCAGTCGGCCTT 65720 >seq556 Length=184947 Score = 145 bits (160), Expect = 9e-29 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||||||||||||| |||| |||||| | || |||||| | || |||||| Sbjct 86843 GCCGCCAACTACCTCGACATCAAGGCTCTTCTCGATGTCGGCTGCAAGACCGTCGCCAAC 86902 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| || || ||||||||||||||||| |||||| || ||| Sbjct 86903 ATGATCAAGGGCAAGTCCCCTGACGAGATCCGCAAGACCTTCAACATCCAGAACG 86957 >seq664 Length=348155 Score = 125 bits (138), Expect = 9e-23 Identities = 127/163 (78%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 19040 CCAAGAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCT 19099 |||| |||||||||| ||||||||||||| |||||| || ||||| || | || || Sbjct 204330 CCAACAGGACAGCATTGGCGGCACGGTGAGCTGCGTGATACGGAACGTCCCTTCCGGTCT 204271 Query 19100 CGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCC 19159 || ||||| ||||| |||||| |||||||| ||| || || |||||||| || || Sbjct 204270 TGGTGAGCCCTGCTTCGACAAGCTCGAGGCCATGCTTGCGCATGCCATGCTCAGCATTCC 204211 Query 19160 GGCCACCAAGGGATTCGAGATTGGCAGCGGGTTT--GCGGGTG 19200 ||||| ||||| ||||| ||||| | ||||||| ||||||| Sbjct 204210 CGCCACAAAGGGCTTCGATATTGG-ATCGGGTTTCGGCGGGTG 204169 Score = 118 bits (130), Expect = 1e-20 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||||||||| |||| ||| ||||||| |||||||| | | ||||||| Sbjct 293215 CTGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCT 293274 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||||||| || | |||| || | ||| || | ||| | | || Sbjct 293275 AGTGCCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGACC 293334 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||| || || | ||||||||| | ||||| ||||| ||||||||||| || || Sbjct 293335 GATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 293394 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACG 1630282 ||| || |||||||||| | ||| ||||| |||| Sbjct 293395 GATGCTATCCTCCTTCATGTCGATGAGGAAGCAAGACG 293432 Score = 109 bits (120), Expect = 7e-18 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 18093 CACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTG 18152 || || ||||||||||||| | ||| |||||||| |||| ||| ||||| | Sbjct 205005 CAGCTATGGCGAGTCGCACTGCCTCTCCGTGGGCTGCATTGTCGATGGCTGCCCGCCAGG 204946 Query 18153 CATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGG 18212 ||||| || |||||||||| |||||||| ||| || || || || ||||| ||| | Sbjct 204945 CATGCAGCTCACCGAGGCCGATATCCAGCCCCAGATGACCCGCCGTCGCCCGGGTCAGAG 204886 Query 18213 CGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAA 18272 |||| | | || ||||| ||||| || || || |||||||||||||| ||| Sbjct 204885 CGCAATCACGACCCCGCGAAACGAAAAGGACCGGGTGGAGATCCAGTCGGGCACCGAGTT 204826 Query 18273 CGGCCTCACGCTCGGCTCGCCCGTCGGC 18300 ||| | ||||| || ||||| ||||| Sbjct 204825 TGGCGTGACGCTGGGTACGCCCATCGGC 204798 Score = 96.9 bits (106), Expect = 4e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| ||||| ||| |||| || ||||| || |||||||| |||||| |||||||| Sbjct 293062 CATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTT 293121 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 |||||||||||| || || || | || | |||||||||||| ||||| ||||| Sbjct 293122 GCCGTGGTTCTTGCGAAGATCAAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTA 293181 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 | ||| ||||| ||| |||||| ||| || Sbjct 293182 GATGGCGAAGGCACCCGGACGCTTGTTGCCACC 293214 >seq312 Length=273352 Score = 116 bits (128), Expect = 5e-20 Identities = 159/217 (73%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 733054 TCAAGATCGTGACGCGCGCCATGCGCCAGCCCGAGTTGGGCGACAAACTGTCGTCGCGCC 733113 |||||||| |||||| | ||| | ||||||| |||||||||| | |||||||| | Sbjct 175175 TCAAGATCCAGACGCGGCAAACGCGGCGGCCCGAGCTGGGCGACAAGTTCTCGTCGCGGC 175116 Query 733114 ACGGCCAAAAGGGCACCGTGGGCAGCGTGCGCTCCACCGA-GGACATGCCCTGGTCGCCG 733172 |||| ||||||||| ||| |||| | | ||| | || ||||||||| | || || Sbjct 175115 ACGGGCAAAAGGGCGTCGTCGGCATCAT-CGCCGAGCAGACGGACATGCCGT--TCAACG 175059 Query 733173 CGCGGCGGCGCCACGCCCGACATCGTGATCAACCCGCACGCCATCCCGTCGCGCATGACC 733232 | ||| | || |||||| | || |||||||||| | |||||||||||||||| Sbjct 175058 ACCAA-GGCATCTGCCCGGACATCATCATGAACCCGCACGGCTTCCCGTCGCGCATGACG 175000 Query 733233 ATGGGCAAGATGCTCGAGGCCCTCCTGGGCAAGGTGG 733269 ||||||||||||| ||| || |||||||| || Sbjct 174999 GTGGGCAAGATGCTGGAGCTGCTGTCGGGCAAGGCGG 174963 >seq534 Length=193060 Score = 105 bits (116), Expect = 8e-17 Identities = 287/432 (66%), Gaps = 12/432 (3%) Strand=Plus/Plus Query 1726726 CACGCTCCCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTC 1726785 || ||| ||||||||||||||||||||||| |||| | ||| | || |||| ||| Sbjct 147786 CAGGCTACCGTCGGTGCCGTTCTTGAAGCCAATGGGGTAGGACAGACCGGAGGCCAGCTC 147845 Query 1726786 GCGGTGCACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGC 1726845 ||||||| |||| |||||| || || ||||| | ||| ||| || | |||||| | Sbjct 147846 ACGGTGCAACTGGGACTCGGTGGTCCGTGCGCCAATGGCACCCAGCGAGATCAGGTCGGA 147905 Query 1726846 CAAATAA-GGGGCCACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGA 1726904 | | ||||| | | | | ||| | |||| ||| | |||| || | | | Sbjct 147906 GAGGAACTGGGGCGAGATGGTGTC-GAGCATCTCGCTGGCGATGGGC--ATGCCCTG-GC 147961 Query 1726905 CGACGAGATCGCGCAACAGGCGGCGCGA--CGCCGTCAGGCCGTCGGCCAGGCGGCACGA 1726962 || || |||| | || ||||| ||| | ||||| | | | | | Sbjct 147962 CGGTCAGGTCGCAGTAGAGCTTACGCGAGACGCGG--AGGCCCTTGTTGATCTTGTAGCT 148019 Query 1726963 CCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTC 1727022 | |||| | ||| |||||| || ||||||||||| ||||| || ||||| ||||| || Sbjct 148020 CTCGTCCATGTCCGGGTCGTTGATTAGGCCCTTCCAGCCGACCGTGGTGCGGGGCTTCTC 148079 Query 1727023 GACATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCG 1727082 || ||||||||||||| | ||| ||| ||| | | || ||| | | | ||| Sbjct 148080 GAGGTAGGCGCGCATGATGATGCACAGCTCGTTGTTCAGCTTGTC---GGCCAGGGCCTT 148136 Query 1727083 CAGGCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGAT 1727142 ||||| ||| || |||||| ||| | | |||||||| || || || || || || Sbjct 148137 GAGGCGCTGGCAGTACTCGACGGCGGTCTCGGGGTCGTGGATGGAGCAGGGGCCGACCAT 148196 Query 1727143 AACCAGCAGCCG 1727154 |||||||| || Sbjct 148197 GACCAGCAGGCG 148208 >seq73 Length=340862 Score = 95.1 bits (104), Expect = 1e-13 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGC 1726792 ||||||||||||||||||||||||| | | | ||| | || || | ||| |||||| Sbjct 133097 CCGTCGGTGCCGTTCTTGAAGCCGACAGGGAAGGACAGGCCGGAGGCAAGCTCACGGTGC 133156 Query 1726793 ACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCC-CACGCCACCAGGTCTGCCA 1726847 | |||||||||||||| | |||||||||||||||| ||| || ||| || |||| Sbjct 133157 AGTTGGCTCTCGGTCGTCCTCGCGCCCACGGCGCCCACAC-TCAGCAGATCGGCCA 133211 >seq101 Length=66550 Score = 91.5 bits (100), Expect = 2e-12 Identities = 140/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 1628375 CGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACC-- 1628432 ||||||| ||| || ||||| ||||| ||| || | |||| ||||||||| | Sbjct 6570 CGTAGCAGTCGACGAGCCCGGGACACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCT 6511 Query 1628433 GGTC-ACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCG 1628491 |||| ||| |||||||| || ||||| | |||||| ||||| |||||||| | Sbjct 6510 GGTCGACC---CGGCGCATGAACAGGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTG 6454 Query 1628492 CCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGT 1628551 |||| ||| ||||||||| | | |||| ||| |||| | | ||||||| Sbjct 6453 CCCGCAGCTCATCCTTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACATCGGCGT 6394 Query 1628552 GCCACGGCTCCAGGTAG 1628568 ||||||||||||||||| Sbjct 6393 GCCACGGCTCCAGGTAG 6377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107082247109998