Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq246 203 5e-46 seq204 187 4e-41 seq556 136 6e-26 seq101 129 9e-24 seq312 123 4e-22 seq664 105 1e-16 seq73 96.9 5e-14 >seq246 Length=526737 Score = 203 bits (224), Expect = 5e-46 Identities = 367/525 (70%), Gaps = 10/525 (2%) Strand=Plus/Minus Query 2411475 GTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCC 2411534 |||||||||| ||||| || ||| | ||||| ||||| | ||| || || Sbjct 28828 GTAGCCCAGCTTCGGCAACGCCTCCTTCGCCAGCGCAAAAATCTTCCTCTGATCCACGCC 28769 Query 2411535 GCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAC 2411594 || |||||| |||| || | | || |||||||||||||||||||||||||||||||| Sbjct 28768 ACCGAACTGGACGTCCACACCCAAGTACTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAT 28709 Query 2411595 GAGGTTGCTGAGCGGCGGGTTG-CGGTCCATCTTGACCACCTGGGCGGCGGC-CTTTTG- 2411651 ||| | ||| |||||||| | ||| |||||| |||| ||| |||| || ||| Sbjct 28708 CAGGCCGGACAGCAGCGGGTTGTCCGTCTG-CTTGACGACCTCGGCACCGGCTCTCTTGG 28650 Query 2411652 CGCCGTGC-CGACGGTCACGCGCGCCGTCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGC 2411710 || ||||| || ||||| | | || ||||||||| ||||| | | ||||| ||| Sbjct 28649 CGTCGTGCTCGGTGGTCATG-GTGC--TCAGGCGCAGCAGGTCCATCATGTAGTTTTCGC 28593 Query 2411711 CATGCTGGTAATCGCTGCCGCGCACAAATTCGAGACGATCCAGCGGGACGCCAATGTGCT 2411770 | |||||| ||||| || |||| || ||||| || || | || ||||| | | || Sbjct 28592 TCTTCTGGTACTCGCTTCCCAGCACGAACTCGAGGCGGTCGACCGACACGCCGACGGCCT 28533 Query 2411771 GGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGTGCTCGACGAGGTCCCACG 2411830 |||| | ||||| || ||| ||| | | |||| | ||| || || | Sbjct 28532 TGAGCGACTCGGTGATGACATACTTGTAGTACTTGGCGCGGTAGTTGACCAGCTCAATGG 28473 Query 2411831 GCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACATC 2411890 ||| |||| ||||| ||| |||||| | |||||| | |||||| | || | || | Sbjct 28472 GCGCCTTGAGGTTGTCCAGGAAGGCGTGGATGTCGGCCAGCAGGATCTTGACATGGCAGC 28413 Query 2411891 CGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCC-CAGATGGGGCTTG 2411949 | ||||| || || | || | || | ||||||||||||||||| ||| || ||| || Sbjct 28412 CCGCCTGCAGGAACTGCGCGATCTTGAGCATGGGCACAAAGTAGCCGCAG-TGCGGCCTG 28354 Query 2411950 CCCGTCGGCGCGGTGCCCCAATAAATGCAGAGAGGGCGCTCGGCC 2411994 ||||| | ||| |||||||| || |||| || || |||||| || Sbjct 28353 CCCGTGGTCGCCGTGCCCCAGTAGATGCGCAGCGGCCGCTCGCCC 28309 >seq204 Length=141573 Score = 187 bits (206), Expect = 4e-41 Identities = 192/251 (76%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 ||||||| ||||| || || || || ||| |||||| |||||||||||||| || Sbjct 66227 TGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACTGA 66168 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||| || |||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 66167 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGA 66108 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 ||| | | ||||||||||| |||||||| || ||||||||||||||||| | ||| |||| Sbjct 66107 GCGCCACCAGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCA 66048 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||| || || |||||||||| || | | ||||| |||||||| ||||| |||| Sbjct 66047 TGCCGAGAAGAGCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCT 65988 Query 794131 CGATGATGATC 794141 ||||||||||| Sbjct 65987 CGATGATGATC 65977 Score = 114 bits (126), Expect = 2e-19 Identities = 159/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | ||||||||| | |||||||| ||||||| || | |||||||| | Sbjct 65533 AAGCAGCGGGCCTCGGGGATCTGGACCTCGGAGCTGAAGCGCTCGACGAGGTTCTCGTTC 65474 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 |||||||| || |||||||| |||||||| ||||| ||| ||| ||||||||| Sbjct 65473 ACGATGCCATCCGACGCGGCGAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCG 65414 Query 796261 TCGCTGA---GCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317 ||| ||| || | ||||| | ||| | ||| || | |||||| || ||| Sbjct 65413 TCGTTGAGGCGCTTGTTCCAGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCAGCAGTC 65354 Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT 796359 || || || ||||||||||| |||||||||| ||| ||| || Sbjct 65353 CAGAAAGAAGCCTCGGCCTTCTTGTACATCTGCCAGATCTGT 65312 Score = 91.5 bits (100), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 794595 GTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAA 794654 ||| |||||||||||||||||||||||||| ||||||||||| || || ||||||||| Sbjct 65600 GTACGTGTCGATGAGGAGCGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAA 65541 Query 794655 GCCATAAAAGCAG 794667 ||| || |||||| Sbjct 65540 GCCGTAGAAGCAG 65528 >seq556 Length=184947 Score = 136 bits (150), Expect = 6e-26 Identities = 99/115 (86%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||||||||||||||| | || |||||| | || ||||||||||| |||||| Sbjct 86843 GCCGCCAACTACCTCGACATCAAGGCTCTTCTCGATGTCGGCTGCAAGACCGTCGCCAAC 86902 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| || || || |||||||||||||| |||||| || ||| Sbjct 86903 ATGATCAAGGGCAAGTCCCCTGACGAGATCCGCAAGACCTTCAACATCCAGAACG 86957 >seq101 Length=66550 Score = 129 bits (142), Expect = 9e-24 Identities = 247/368 (67%), Gaps = 4/368 (1%) Strand=Plus/Minus Query 2071615 CCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCA 2071674 || |||| || ||||||||| | | |||| ||||||||||| ||||| | ||| | Sbjct 6742 CCGAGGTGCTTCTGGTTGCTCTTGACGTTGCAGGCGTCCTTGTACAGCACGCTTGGCCCG 6683 Query 2071675 CCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTC 2071734 |||||||| |||||| | ||| | ||||||||| | | | ||| | || | | Sbjct 6682 CCCGTCTCCATCTGCATCTCGACCACGGCCGACCACAGTGCCCTCGCCTTGAGCGTGCGC 6623 Query 2071735 CTCGCGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCAC 2071794 | |||||||| |||| ||||| || || | ||| ||| Sbjct 6622 CGGCCGCGGCCCGTCCCCTCGTACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTAGCAG 6563 Query 2071795 TCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACG 2071854 ||| || ||||| ||||| |||||| | |||| |||||||||| | | || Sbjct 6562 TCGACGAGCCCGGGACACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCGACC 6503 Query 2071855 CGGCGCATAAACAGGTC--GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCT 2071912 |||||||| |||||||| |||| |||||| |||| || ||||| ||||| || Sbjct 6502 CGGCGCATGAACAGGTCCGGCAC--CCACAGCGCGTAGGCCAGGTCGCGTGCCCGCAGCT 6445 Query 2071913 CCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCT 2071972 | ||||||||| | | ||||| ||| |||| | || |||||||||||||||| Sbjct 6444 CATCCTTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACATCGGCGTGCCACGGCT 6385 Query 2071973 CCAGGTAG 2071980 |||||||| Sbjct 6384 CCAGGTAG 6377 >seq312 Length=273352 Score = 123 bits (136), Expect = 4e-22 Identities = 165/220 (75%), Gaps = 11/220 (5%) Strand=Plus/Minus Query 653619 TCAAGATCGTCACCCGCGCCATGCGC--CAGCCCGAGGTGGGCGACAAACTGTCGTCGCG 653676 |||||||| || |||| || ||| | ||||||| |||||||||| | |||||||| Sbjct 175175 TCAAGATC--CAGACGCGGCAAACGCGGCGGCCCGAGCTGGGCGACAAGTTCTCGTCGCG 175118 Query 653677 CCACGGGCAAAAGGGCACCGTGGGCAGCGTGCGCTCGACC-GA-GGAAATGCCGTGGTCG 653734 ||||||||||||||| ||| |||| | | ||| ||| | || ||| ||||||| || Sbjct 175117 GCACGGGCAAAAGGGCGTCGTCGGCATCAT-CGC-CGAGCAGACGGACATGCCGT--TCA 175062 Query 653735 CCGCGCGGGGGCGCCACGCCCGACATCGTCATCAACCCGCACGCCATCCCGTCGCGCATG 653794 || | || | | || |||||| |||| |||||||||| | |||||||||||||| Sbjct 175061 ACGACCAAGGCATCTGC-CCGGACATCATCATGAACCCGCACGGCTTCCCGTCGCGCATG 175003 Query 653795 ACCATGGGCAAGATGATGGAGGCCCTCCTGGGCAAGGTGG 653834 || ||||||||||| ||||| || |||||||| || Sbjct 175002 ACGGTGGGCAAGATGCTGGAGCTGCTGTCGGGCAAGGCGG 174963 >seq664 Length=348155 Score = 105 bits (116), Expect = 1e-16 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || |||||||| |||| ||| ||||||| |||||||| | | ||||||| Sbjct 293215 CTGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCT 293274 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||||||| || | |||| || | ||| || | ||| | | || Sbjct 293275 AGTGCCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGACC 293334 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| || || | ||||||||| | ||||| | || || || |||||||| || || Sbjct 293335 GATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 293394 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACG 2073757 ||| || |||||||||| | || ||||| |||| Sbjct 293395 GATGCTATCCTCCTTCATGTCGATGAGGAAGCAAGACG 293432 Score = 87.8 bits (96), Expect = 3e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| || |||| || || ||||| |||||| |||||||||||||||||||| | Sbjct 293079 TCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAA 293138 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 | || || | || || |||||||||||| ||||| |||||| ||| ||||| ||| Sbjct 293139 GATCAAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCG 293198 Query 2071997 TGCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 293199 GACGCTTGTTGCCACC 293214 >seq73 Length=340862 Score = 96.9 bits (106), Expect = 5e-14 Identities = 211/311 (68%), Gaps = 5/311 (2%) Strand=Plus/Plus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 |||||||||||||||| || || ||||| || || | ||| | || || | || |||| Sbjct 133095 TGCCGTCGGTGCCGTTCTTGAAGCCGACAGGGAAGGACAGGCCGGAGGCAAGCTCACGGT 133154 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCC-CACGCCACGAGGTCTGCCAAA 2175194 ||| ||||||||||| || | |||||||||||||||| ||| || || || |||| Sbjct 133155 GCAGTTGGCTCTCGGTCGTCCTCGCGCCCACGGCGCCCACAC-TCAGCAGATCGGCCAGG 133213 Query 2175195 TAGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGACGACC 2175254 | ||| | | || | |||| || | ||| ||| ||| || | Sbjct 133214 AACTGCGGAGAGATTGTATCCAGCATCTCGCTCGCAATAGGCATGCC-ACG--CTCGGTC 133270 Query 2175255 AGGTCGCGCAGCAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTCG 2175314 |||||| | || |||||||| | |||||| | || | || |||| Sbjct 133271 AGGTCGACGAAAAGCTGACGCGATATTCTGAGGCCCTTATTAATCTGGAAAGAGTTGTCG 133330 Query 2175315 AGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAG 2175374 | |||||||||| || ||||||||||| || ||||| ||||| ||||| |||| ||| Sbjct 133331 ATGTCGGGGTCGTTGATTAGGCCCTTCCAACCCACGGTGGTGCGGGGCTTCTCGAGGTAG 133390 Query 2175375 GCGCGCATGAC 2175385 | ||||||||| Sbjct 133391 GAGCGCATGAC 133401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916172576054666