Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq204 174 2e-37 seq664 123 4e-22 seq534 89.7 7e-12 >seq204 Length=141573 Score = 174 bits (192), Expect = 2e-37 Identities = 194/254 (76%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 1456522 GATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGC 1456581 ||||||| ||||||| ||||| |||||||| ||||| | | || ||||||| || || Sbjct 65977 GATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCCCGTCGC 66036 Query 1456582 GCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641 || |||||||||| ||||| |||||||||||||||||| || || ||||| |||||| Sbjct 66037 TCTTCTCGGCATGAATGCCAC-GCTCATGTGCCAGTACATCGAGTTC-GTCGCGGACCGC 66094 Query 1456642 CTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGAT 1456701 ||||| | |||||||||| | ||||| ||||| | ||||||| ||| | || Sbjct 66095 CTGCTGGTGGCGCTCGGCAACA-AGAAGTACTACAACGCCACCAACCCCTTCGACTTCAT 66153 Query 1456702 GGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGC 1456760 |||| || |||||| |||||||||||||| |||||| || | ||| || ||| Sbjct 66154 GGAGAACATTTCGCTCAGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCA 66213 Query 1456761 CAAGGCCGGCGTCA 1456774 ||||||||||||| Sbjct 66214 GAAGGCCGGCGTCA 66227 Score = 159 bits (176), Expect = 5e-33 Identities = 210/288 (73%), Gaps = 5/288 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||||||||| || || ||||| || |||||| | || | Sbjct 65315 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGATC 65373 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | ||||| || | | ||||||||||||| |||||| Sbjct 65374 TCTCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCT 65433 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| |||||||| || |||||| |||||||||||| ||||||||| | || Sbjct 65434 CCCACGTTCTCGCCTTCTT-CGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAG 65492 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | |||||||| | || ||||| || | || ||||| ||||||||| Sbjct 65493 CGCTTCAGCTCCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATG 65552 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTAC 1456059 || || ||||||||||| || |||||||||||||| |||||||| ||| Sbjct 65553 ATGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTAC 65600 Score = 93.3 bits (102), Expect = 6e-13 Identities = 115/154 (75%), Gaps = 9/154 (6%) Strand=Plus/Plus Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 |||||||||||||| || |||||| ||||| | |||||| |||||| || Sbjct 65720 AAGGCCGACTGGGCTCTGCGCTGGATCTGCGACAAGAA----CTCGAC-CTTTGCATCGC 65774 Query 1456183 GGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCT 1456241 | || | | ||| ||||| |||||||| ||||| ||| ||| ||| | |||||| Sbjct 65775 GTCTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCT 65834 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 | ||||||||||||||||| || ||||||||||| Sbjct 65835 TCTGGCTCAAGAAGCGCGGTCTTATGCCCGGTCT 65868 >seq664 Length=348155 Score = 123 bits (136), Expect = 4e-22 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 259965 CGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCA 260024 |||| ||||| || | |||||||||| ||| ||||| || ||||| ||||| |||| Sbjct 293432 CGTCTTGCTTCCTCATCGACATGAAGGAGGATAGCATCGACGGTATCTACGACACCCTCA 293373 Query 260025 AGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGC 260084 || ||||| | ||||||||| | || || ||||||||| | | ||| | | Sbjct 293372 AGACCTGCGCCATGATCTCCAAGACCGCTGGAGGCATCGGTCTCAATGTTCACCGCATCC 293313 Query 260085 GCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGC 260144 | ||| | || |||| | || |||||||||||| ||||||| | | ||||||| Sbjct 293312 GTGCCACTGGTAGCTACATTGCTGGCACCAACGGCACTAGCAACGGCTTGATTCCCATGC 293253 Query 260145 TTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 ||||||| | ||| |||| ||||||||||| |||||| Sbjct 293252 TTCGCGTCTACAACAACACTGCGCGCTACGTTGACCAG 293215 Score = 120 bits (132), Expect = 4e-21 Identities = 353/539 (65%), Gaps = 14/539 (3%) Strand=Plus/Minus Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTCGTTGCTC 262938 |||||||||||| || ||| | || ||||| || | |||||||| ||||| Sbjct 292341 TGGGACTGGGACAGCGTGAAGGCTGAGATTGCTCAGCACGGTATCCGCAACTCTCTGCTC 292282 Query 262939 GTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGAG 262998 || || | ||||||||| ||| |||| |||||||| ||| || |||| |||||| Sbjct 292281 GTCGCACCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACGAGTGTTTCGAG 292222 Query 262999 GTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAAC 263058 |||| ||||||||| | ||||| ||||| | ||||| ||| || |||||| Sbjct 292221 CCGTACACGTCGAACATCTACTCTCGCCGTGTGCTGGCTGGCGAGTTTCAGGTCGTCAAC 292162 Query 263059 CGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACCGG 263118 | | || ||||| | |||| | | |||||||||| | | | |||| Sbjct 292161 CCCTGGCTCCTCAAGGACTTGGTCGACCTCGGCCTGTGGTCTGATCAGATGAAGAACCGC 292102 Query 263119 CTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATCTC 263178 |||| || | | || || | ||| | | || | ||| | || || Sbjct 292101 ATCATCGCTTCCAACGGTTCCATCCAGCAGATCCCCAACAT-----TCCCGAC-GACATC 292048 Query 263179 AAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATGGCG 263235 ||||| |||| |||||| || |||||| | | | || ||||| | | ||||| Sbjct 292047 AAGGCGCTCTACAAGACGGTCTGGGAGCTTTCTCAGCGC---ACCATCGTCCAGATGGCT 291991 Query 263236 GCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACCCG 263295 ||||| || | ||| | |||||| ||| ||||||||| | || | ||||| Sbjct 291990 GCCGATCGGGGTGCCTTCATTGACCAGTCCCAATCGCTCAACATCCACATGAAAGACCCT 291931 Query 263296 ACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGACTGGC 263355 ||| | | ||||||||||||||| || ||| | ||| |||||||||||| Sbjct 291930 ACGATGGGCAAGATCACGTCGATGCACTTTGCTGGCTGGAAGCTCGGTCTCAAGACTGGC 291871 Query 263356 ATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCC-ATTCAATTCACCGTCGATCAGG 263413 |||||||| || || || | | |||| | | |||| ||||| ||||| ||||| |||| Sbjct 291870 ATGTACTACCTCCGTACGCAGGCCGCCG-CTGCGCCAATTCAGTTCACTGTCGACCAGG 291813 >seq534 Length=193060 Score = 89.7 bits (98), Expect = 7e-12 Identities = 103/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 165753 GACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAG 165812 |||||| || || ||| ||| | || || || ||||||||| |||| ||||||| ||| Sbjct 147902 GACCTGATCTCGCTGGGTGCCATTGGCGCACGGACCACCGAGTCCCAGTTGCACCGTGAG 147843 Query 165813 ATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGTG-GC 165871 |||| || | ||| | |||||||||||||| ||| |||||||||| ||| || | Sbjct 147842 CTGGCCTCCGGTCTGTCCTACCCCATTGGCTTCAAGAACGGCACCGACGGTAGCCTGAGT 147783 Query 165872 GACGGCCCTCGATGCC 165887 | | ||| |||||||| Sbjct 147782 GTC-GCCGTCGATGCC 147768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177744262424428