Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq16 123 3e-23 seq235 96.9 4e-15 seq663 87.8 2e-12 >seq16 Length=352857 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || ||||| ||||| ||||||||||||||| Sbjct 16690 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 16631 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| || || ||||| ||||||||||| || || Sbjct 16630 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGAGGA 16571 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || ||||| ||| | ||||||||||| || || Sbjct 16570 ATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACC 16511 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 || || || ||||| || ||||| Sbjct 16510 TCAAGGGTGATGGTCTTGCCGGT 16488 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || || || |||||||| ||||||||||| | ||| | Sbjct 17420 AGACGAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGC 17361 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| || || || || || | |||||||||||| ||||| || || || Sbjct 17360 CCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCC 17301 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || || || ||| | |||||||| ||||| || ||||| || Sbjct 17300 TTGTCCTGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACCTCGAGCGTG 17241 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | || || ||||| || ||||| Sbjct 17240 ATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCAT 17203 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || || || | || || ||||| |||||||||||||| | ||| | Sbjct 17192 AGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGG 17133 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| || || || || |||| ||||||||| || || || ||||| || Sbjct 17132 CCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCC 17073 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || || || || ||| | ||||| || || || || || | || Sbjct 17072 TTGTCTTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCGACTTCCAAGGTG 17013 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| | || || ||||| |||||||| Sbjct 17012 ATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 16975 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || || || ||||| || |||||||||||| Sbjct 16973 CCACCACGGAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 16914 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| || || ||||| |||||||| || || || Sbjct 16913 AGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 16854 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| || || || || Sbjct 16853 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 16794 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 || || || ||||| || || || Sbjct 16793 TCAAGGGTGATGGTCTTGCCAGT 16771 >seq235 Length=704811 Score = 96.9 bits (106), Expect = 4e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||||||||| || ||||| ||||| || ||||||||||| || |||| | Sbjct 89963 AGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 90022 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| || || |||| ||||||||| || || || ||||| || Sbjct 90023 CCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCC 90082 Query 134616 TTTTCT 134621 || ||| Sbjct 90083 TTGTCT 90088 >seq663 Length=530868 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| | |||| | || |||||||| ||||| || || | Sbjct 493144 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 493085 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| |||||||| || || || ||||| || || || || || || ||||| || Sbjct 493084 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 493025 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || || || ||||| || ||||| || || || | || || |||| Sbjct 493024 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 492965 Query 134704 A 134704 | Sbjct 492964 A 492964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505394015668880