Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq664 168 8e-37 seq204 107 2e-18 >seq664 Length=348155 Score = 168 bits (186), Expect = 8e-37 Identities = 365/543 (67%), Gaps = 11/543 (2%) Strand=Plus/Minus Query 104540 ATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGG------G 104593 ||||| ||||||||||| | ||| ||| |||||||| || | || | ||| | Sbjct 293262 ATTCCCATGCTTCGCGTCTACAACAACACTGCGCGCTACGTTGACCAGGGTGGCAACAAG 293203 Query 104594 CGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTC 104653 |||| ||| | |||| |||| || |||||||||||||| || || | ||| Sbjct 293202 CGTCC---GGGTGCCTTCGCCATCTACCTCGAGCCATGGCACGCCGACGTCTTCAGTTTC 293146 Query 104654 CTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCT 104713 ||||| | || ||||| || | ||||| | ||| ||||| || |||| |||| Sbjct 293145 CTTGATCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGGGCTCGCGACCTGTTCTACGCT 293086 Query 104714 CTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTT 104773 ||||||||||| |||||||||||||| | || ||| ||| |||| ||| | ||| | Sbjct 293085 CTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAGCAGAACGGCACCTGGACCCTCATG 293026 Query 104774 TGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTAC 104833 || || || || || || || | |||| || || ||||| || || |||||| Sbjct 293025 TGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTATGGAGACGAGTTCGAGGCTCTTTAC 292966 Query 104834 ACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAA 104892 |||||||| | || ||||| | || ||| || | ||| | || | | ||| | Sbjct 292965 GAGCAGTACGAGAAGGAGGGTCGCGGCCGTGAGACCGTCCGCGCT-CAGAAGCTTTGGTA 292907 Query 104893 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTG 104952 || |||||| || | || |||||| |||| || | |||||| ||||| || ||| Sbjct 292906 CGCCATTCTCGAGGCCCAGGTCGAGACCGGTAACCCCTTCATGCTGTACAAGGATCACTG 292847 Query 104953 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGA 105012 |||| ||||| || |||||||| | ||| |||| || ||||| || || || Sbjct 292846 CAACCGCAAGAGCAACCAAAAGAACCTTGGTACGATCCGCAGCTCCAACCTTTGCTGCGA 292787 Query 105013 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 105072 ||| | || | || | | |||||| ||||| || ||| | || || | ||||| Sbjct 292786 GATCGTCGAGTACACTGCCCCCGATGAGGTCGCTGTCTGCAACTTGGCCTCGCTGGCTCT 292727 Query 105073 CCC 105075 ||| Sbjct 292726 CCC 292724 >seq204 Length=141573 Score = 107 bits (118), Expect = 2e-18 Identities = 159/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 94792 |||||| || || | | ||| || || |||||| || ||| | || |||| | | Sbjct 65701 AGTTCCCTGCATCAAGAGGAAGGCCGACTGGGCTCTGCGCTGGATCTGCGACAAGAACTC 65760 Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852 | ||||||| ||| || | || || || || ||||||||||||||| || | Sbjct 65761 GA-CCTTTGCATCGCGTCTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCT 65819 Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912 ||||| | | || | |||||||||||||| ||||| ||||| |||||| |||||||| Sbjct 65820 CCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTTATGCCCGGTCTCACCTTCTCCA 65879 Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||| || || ||||| ||||| | ||| || ||||| Sbjct 65880 ACGAGCTCATTTCCCGTGATGAGGGCATGCACACCGACTTTGC 65922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583255740212560