Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq664 111 2e-19 >seq664 Length=348155 Score = 111 bits (122), Expect = 2e-19 Identities = 288/439 (66%), Gaps = 0/439 (0%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || || || ||||| ||||||| ||| || || || || || || ||||| | | | Sbjct 292976 TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTC 293035 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || | | || || |||||||| ||||||||||| ||||| ||||| || Sbjct 293036 CAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 293095 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 || || || | | ||| || || || ||||| |||||| ||||| | Sbjct 293096 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCAAGGAAACTGAAG 293155 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | || | |||||||| || || || || || | ||||||| || || || || ||| Sbjct 293156 ACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 293215 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | || | |||||||| || || || | | ||| ||||| | |||||| Sbjct 293216 TGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTA 293275 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 || || || || |||| ||| || || ||| ||||| || || | || || Sbjct 293276 GTGCCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGACCG 293335 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || ||||| || | || ||||| | || ||| || | ||||| ||||| || || Sbjct 293336 ATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCG 293395 Query 76940 ATACTATCATCCATCATGT 76958 || ||||| ||| |||||| Sbjct 293396 ATGCTATCCTCCTTCATGT 293414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712928215294080