Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq80 152 4e-32 seq115 89.7 4e-13 seq114 84.2 2e-11 >seq80 Length=2705162 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| ||||||||| |||||||| |||||||| ||||||| Sbjct 1573232 CCACCGCGCAGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 1573173 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||||||||| || ||||| | || || | |||||||||| ||| Sbjct 1573172 AGGGTACGGCCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1573113 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | | ||| || || | ||| | Sbjct 1573112 ATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCGACT 1573053 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||||||||| | || ||||| || |||||||| Sbjct 1573052 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 1573006 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| | | Sbjct 1573004 CCACCACGGAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1572945 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| ||||| || | || | | |||||||||| ||| Sbjct 1572944 AGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 1572885 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || || ||| Sbjct 1572884 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 1572825 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| ||||||||||| || Sbjct 1572824 TCAAGGGTGATGGTCTTGCCAGT 1572802 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||| |||||||| ||||| | | Sbjct 1572721 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 1572662 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || || ||||| ||||| || | || | | |||||| ||| || Sbjct 1572661 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGAGGA 1572602 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || |||||| || || | | ||| || || | ||| Sbjct 1572601 ATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACC 1572542 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| |||||||||||||| Sbjct 1572541 TCAAGGGTGATGGTCTTGCCGGT 1572519 >seq115 Length=1808013 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | ||||||||||| || ||||| ||||||| Sbjct 898954 CCACCACGCAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 899013 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| ||||| || | || || | |||||||||| ||| Sbjct 899014 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 899073 Query 21069 ACGCCTTCCTTGTC 21082 | ||| |||||||| Sbjct 899074 ATGCCCTCCTTGTC 899087 >seq114 Length=4268993 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 20986 CCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAA 21045 |||| || ||||| ||||| | |||||| || | ||||| ||||| ||||| || | | Sbjct 2016663 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 2016604 Query 21046 TAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGC 21105 | || | |||||||||| ||| | ||| |||||||| |||||| || || | | Sbjct 2016603 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 2016544 Query 21106 CGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAA 21165 ||| || || || ||| || | ||| ||||||||||| || | || ||||| | Sbjct 2016543 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 2016484 Query 21166 A 21166 | Sbjct 2016483 A 2016483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258608177340