Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq111 248 8e-61 seq80 105 6e-18 seq96 82.4 7e-11 >seq111 Length=3622730 Score = 248 bits (274), Expect = 8e-61 Identities = 462/676 (68%), Gaps = 2/676 (0%) Strand=Plus/Minus Query 23026 CGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACA 23085 |||||| | ||||| || || ||||| || || |||||||| || || ||| || Sbjct 919865 CGAGGCCAAGTTGCAGACAGCGACCTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCA 919806 Query 23086 TAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATC 23145 || ||| | ||||| || | || | |||||||| || || ||||| ||| Sbjct 919805 AAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 919746 Query 23146 CTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACAT 23205 |||||| |||||| | || | || ||||||||||| | ||||| || || ||| | Sbjct 919745 CTTGTACAGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAAAG 919686 Query 23206 AGTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACG 23264 |||||||| | || ||| |||| | | || || | |||||||| | ||| | | Sbjct 919685 CTTCTGAGCGCGGACG-GTCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAG 919627 Query 23265 CGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGAC 23324 | || || ||| | || ||| || ||||| || || | | | || |||||||| Sbjct 919626 CCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGG 919567 Query 23325 TCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGA 23384 |||| | || | || || ||| |||| || ||||| || ||||| |||||||||| Sbjct 919566 TCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGA 919507 Query 23385 ACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCA 23444 |||| ||||| || || || ||||| |||||| |||||| | ||| | || | Sbjct 919506 ACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCAAGGAAACTGA 919447 Query 23445 ACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGC 23504 | ||||| || ||||| ||||||||||| | ||| || || ||||| | ||| ||||| | Sbjct 919446 AGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCAC 919387 Query 23505 CCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGG 23564 |||| || ||||| || || ||||||||||| || | ||||| || | | |||||| Sbjct 919386 CCTGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGC 919327 Query 23565 ACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAAC 23624 | |||| ||| || | ||| | || || | | |||||| | || || Sbjct 919326 TAGTGCCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGAC 919267 Query 23625 CTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCT 23684 | |||||||| | | || || ||||| ||||| || || ||||||||||| || | Sbjct 919266 CGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGT 919207 Query 23685 CGATGCTGTCCTCTTT 23700 ||||||| ||||| || Sbjct 919206 CGATGCTATCCTCCTT 919191 Score = 156 bits (172), Expect = 4e-33 Identities = 417/634 (66%), Gaps = 5/634 (1%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTAT-GGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163 || ||| || || ||||| || |||| ||||| | | || || || || ||||||| Sbjct 920786 CTGGTCGACAGTGAACTGAATTGGCGCA-GCGGCGGCCTGCGTACGGAGGTAGTACATGC 920728 Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223 | ||||| ||||| | |||||| | ||| || |||||||| | || || | | Sbjct 920727 CAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATCGACGTGATCTTGCCCATCGTAG 920668 Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283 | | ||||| | |||| ||| || ||| || || || || || |||||||| | Sbjct 920667 GGTCTTTCATGTGGATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCAG 920608 Query 22284 CCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 |||| | | | || ||| || | ||||| || |||||||| || | |||| | Sbjct 920607 CCATCTGGACGATGGTGCGCTGAGAAAGCTCCCAGACCGTCTTGTAGAGCGCCTTGATGT 920548 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403 | || || |||| ||||| || ||||| ||||| || || | Sbjct 920547 CGTCGGGAATGTTGGGGATCTGCTGGATAGAACCGTTGGAAGCGATGATGCGGTTCTTCA 920488 Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463 || ||| ||||| |||| | || ||| || |||| || |||| || || | Sbjct 920487 TCTGATCAGACCACAGGCCGAGGTCGACCAAGTCCTTGAGGAGCCAGGGGTTGACGACCT 920428 Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 |||||||||| | || || ||||| ||| ||||| || ||| |||| |||||| | | Sbjct 920427 GAAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGCTCGAAACACT 920368 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 | ||| || || |||||| |||||| ||||| ||||| || || | || || |||| Sbjct 920367 CGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGAGAGT 920308 Query 22584 TTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACG 22643 | | | ||||||| | ||| | | ||| | | ||||||||| || |||| || Sbjct 920307 TGCGGATACCGTGCTGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCAAAGGTCGGTCG 920248 Query 22644 GCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGT 22703 | | | |||| |||||| ||||| ||||| | ||| || || || ||||| | | Sbjct 920247 GTG---CCTTGTTCCACATGTCGTACTGCAAGATGCCCTGAGAGGCAGGACTGCCCTGGA 920191 Query 22704 ACGTTTCGTACGGACCATATATCGCGGCAAGTTC 22737 | || ||||| ||||||| | | |||||| || Sbjct 920190 AGGTCTCGTAGGGACCATGGAGCTTGGCAAGATC 920157 Score = 111 bits (122), Expect = 1e-19 Identities = 308/461 (67%), Gaps = 16/461 (3%) Strand=Plus/Minus Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || || || |||||||||||||| ||||| ||||| ||| ||| || | || || Sbjct 146876 CTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTC 146817 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| | ||||| ||||| || |||||||| || || || ||||||| | || || || Sbjct 146816 TGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCCCGT 146757 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT--TGTCAATAAAC 58152 || ||||| | || || || ||||| ||||| ||| ||| ||||| ||| || | Sbjct 146756 GATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCACATCAAGTC--GAAGC 146699 Query 58153 CGACGCGGGATCGCATCTTG-GA-CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210 | | | || | | ||| || || |||| |||||| |||| ||||| || ||||| Sbjct 146698 CCAGCCCCGA--GGCTGTTGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTT 146641 Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAA--CAATGATTTGATGTCAAAG 58268 | || || || || || || || | ||||| ||||| | | | | |||| || Sbjct 146640 CCTGACGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACG--CTCATGTGCCAG 146583 Query 58269 TACATTGAGTTTGTTGCCGACAGACTTTTGCT--CGAACTGATTGGAGAGCGTCATTACA 58326 ||||| ||||| || || ||| | || || | || | | ||| || | |||| Sbjct 146582 TACATCGAGTTCGTCGCGGACCGCCTGCTGGTGGCGCTCGGCAACAAGA-AGT-ACTACA 146525 Query 58327 ACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTT 58386 || | | || || || || || ||| | || |||||| |||||||| ||||| | Sbjct 146524 ACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCT 146465 Query 58387 TCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 |||| || ||| | || || || || |||||| ||| Sbjct 146464 TCGAGAAGCGTGTTGGTGACTACCAGAAGGCCGGCGTCATG 146424 >seq80 Length=2705162 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| || || || ||||| |||| |||||| | || Sbjct 1573233 CATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACGCTCGAGGTTGAATCTTC 1573292 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || | || ||||||||| || | ||||| || || Sbjct 1573293 CGACACGATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCGGATCA 1573352 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || |||||||| || ||| |||| ||| || | || || || Sbjct 1573353 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACGCTCTCTGACTACAA 1573412 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| ||||| || ||||| || || |||| ||| | ||| | || || Sbjct 1573413 CATCCAAAAGGAGTCGACCCTGCACTTGGTGCTTCGTCTGCGTGGTGG 1573460 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || |||||| | || || || | || Sbjct 1573006 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAAGTCGAGTCATCG 1573065 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || |||||||| ||| | || || |||||| Sbjct 1573066 GACACGATCGACAACGTGAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAG 1573125 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || || ||| |||| ||| || | || || ||| Sbjct 1573126 CAGCGTCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAAC 1573185 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || |||||| | ||||||||||| Sbjct 1573186 ATTCAGAAGGAGTCGACTTTGCATCTGGTACT 1573217 >seq96 Length=137467 Score = 82.4 bits (90), Expect = 7e-11 Identities = 158/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 23244 CCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCG 23303 ||||||||| | ||| | |||||| || ||| | |||| |||||| | || ||||| Sbjct 7620 CCTCGTACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTAGCAGTCGACGAGCCCGGGAC 7561 Query 23304 ATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGAT 23363 | | ||| ||||| || |||| ||| | || || || | ||| || || | Sbjct 7560 ACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCGACCCGGCGCATGAACAGGT 7501 Query 23364 CCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCT 23423 |||| | ||| || |||||| ||| ||||| || |||| ||| || |||||| | | Sbjct 7500 CCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCCGCAGCTCATCCTTGCCGCCGCTGC 7441 Query 23424 TTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 || | | ||||| || || || || ||||||||||| ||||| ||| Sbjct 7440 GGCCCAGGTTGAGGAAGTCAAAGACATCGGCGTGCCACGGCTCCAGGTAGACG 7388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765759210800