Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq111 125 1e-23 >seq111 Length=3622730 Score = 125 bits (138), Expect = 1e-23 Identities = 291/433 (67%), Gaps = 17/433 (4%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||| | || ||||||||||| ||||| |||||||| || || || ||||||| Sbjct 146876 CTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTC 146817 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||||||||||||||| ||||||||||| || || | |||||| | || || || Sbjct 146816 TGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCCCGT 146757 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGA 125605 || |||||| | ||| ||||||||| || ||||| ||||| ||| || | | Sbjct 146756 GATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCA--CATC-AAGT-CGAA 146701 Query 125606 GTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACA 125665 | ||| || | || || |||| ||| ||| || || || || | Sbjct 146700 GCCCAGCCCCGAGGCTGTTGAGAGGATCATCAT------CGAGGCTGTCGATATCGAGAA 146647 Query 125666 AGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTG 125725 ||||| || || || | || || ||| | | |||||||| || ||| ||||| Sbjct 146646 GGAGTTCCTGACGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTG 146587 Query 125726 CGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---T 125782 | ||||||| ||||| || || || || || ||| | | | | ||| ||||| Sbjct 146586 CCAGTACATCGAGTTCGTCGCGGACCGCCTGCTG---GTGGCGCTCGGCAACAAGAAGTA 146530 Query 125783 TTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAA 125842 |||||||||| || ||||| || |||||| | ||| || || || |||||||| Sbjct 146529 CTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAA 146470 Query 125843 CTTTTTCGAGAAG 125855 ||| ||||||||| Sbjct 146469 CTTCTTCGAGAAG 146457 Score = 120 bits (132), Expect = 5e-22 Identities = 232/336 (69%), Gaps = 10/336 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| || || ||||| | || ||| | || || Sbjct 147337 ATCTGGCAGATGTACAAGAAGGCGGAGGCTTCTTTCTGGACTGCTGAGGAGATTGACCTC 147278 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | || | | || ||||| || || || Sbjct 147277 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCC 147218 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| || | |||||||| |||| || ||||| ||||| ||||| || || || || || Sbjct 147217 CACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGA-GCG 147159 Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 ||| ||| ||| | || || |||| ||||| ||||| ||||| ||||||| Sbjct 147158 CTTCAGCTC-CGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGA 147100 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314 | |||||| | |||||||| | ||||| || || |||| ||||||| |||| || Sbjct 147099 TGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGCCCA 147040 Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACA 125349 ||| || | || || || ||||| ||||||| Sbjct 147039 AGCAGCGCACCTAC---CTGTTCAACGCCATCGACA 147007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058134727400