Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq80 111 4e-19 >seq80 Length=2705162 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || || || |||||||| || || | ||||| || || || || ||| Sbjct 1573430 GTCGACTCCTTTTGGATGTTGTAGTCAGAGAGCGTGCGCCCGTCCTCCAGCTGCTTACCA 1573371 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 || || || || | ||| ||||| || || || || || || ||||||||| ||||| || Sbjct 1573370 GCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGAATC-TTGCTCTT 1573312 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || ||| || ||| ||||| || || |||||||| ||||| || || Sbjct 1573311 CACGTTGTCGATCGTGTCGGAAGATTCAACCTCGAGCGTGATAGTCTTTCCAGTCAGGGT 1573252 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 1573251 CTTGACGAAGATCTGCAT 1573234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396703486420