Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq111 100 3e-16 >seq111 Length=3622730 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || ||||| || || || || || |||||||| || || ||||| | Sbjct 146439 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTC 146498 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | |||| | | ||| | || ||| | | | | || ||| Sbjct 146499 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACCAGCAG 146558 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 || || || || ||||||||||| | ||||||| | || | ||||||||| | | || Sbjct 146559 GCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTG-GCATTCATGCCGAGAAGAG 146617 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 |||| || | |||| || | ||| ||||| || || ||||| || || Sbjct 146618 CGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTC 146666 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384 |||||| || ||| |||||||||| | || | || ||||| || ||||||||||| Sbjct 147160 GCTCGACGAGGTTCTCGTTCACGATGCCATCCGACGCGGCGAAGAAGGCGAGAACGTGGG 147219 Query 120385 TAAGAAAAAATCGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACA 120444 | || || || || | ||||| || |||||||| |||| | ||||||||| | Sbjct 147220 AGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTCGTGGAGGTCCTTGGAGA 147279 Query 120445 TGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 ||| ||||| || | ||||| | || | |||| ||||||||| ||||||| Sbjct 147280 GGTCAATCTCCTCAGCAGTCCAGAAAGAAGCCTCCGCCTTCTTGTACATCTGCCAGA 147336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661711922800