Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq111 286 9e-72 seq114 93.3 1e-13 >seq111 Length=3622730 Score = 286 bits (316), Expect = 9e-72 Identities = 1049/1612 (65%), Gaps = 42/1612 (3%) Strand=Plus/Plus Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| ||| |||||||| | || || ||| || | |||||||| || | | ||||||| Sbjct 919135 TGTTCAACGCTGGAACCCCCAAGCCTCAGTTGGCGTCTTGCTTCCTCATCGACATGAAGG 919194 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | ||| |||||| ||||||| ||||| || |||| || || | || ||||||| | Sbjct 919195 AGGATAGCATCGACGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGACCG 919254 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | || || || ||| | | ||| | ||||| || | || |||||| ||| Sbjct 919255 CTGGAGGCATCGGTCTCAATGTTCACCGCATCCGTGCCACTGGT-AGCTACATTGCTGGC 919313 Query 363748 ACAGGGGGATACTCGAATGGGCTGG-TTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| | | |||| | ||||||||||||| || | |||| |||||| | Sbjct 919314 ACCAACGGC-ACTAGCAACGGCTTGATTCCCATGCTTCGCGTCTACAACAACACTGCGCG 919372 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||||| ||||||||||| ||||| || || || || || || |||||||| Sbjct 919373 CTACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTCGAGCCATG 919432 Query 363867 TCATGCCGATATTTTTGAGTTTC-TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || ||||| | || |||||| |||| || || || ||| || || |||||| | | Sbjct 919433 GCACGCCGACGTCTTC-AGTTTCCTTGATCTTCGCAAGAACCACGGCAAGGAGGAAGTCC 919491 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985 | || || || |||||||| || || ||| || |||| | || ||||| || || ||| Sbjct 919492 GGGCTCGCGACCTGTTCTACGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAG- 919550 Query 363986 CAGGTAAGAAT-TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 ||| | | ||| | ||| | ||||| |||| || || || || | ||||| | Sbjct 919551 CAGAACGGCACCTGGACCCTCATGTGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTAT 919610 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || ||||| | | ||||| ||||| |||| || |||||| | ||| |||| Sbjct 919611 GGAGACGAGTTCGAGGCTCTTTACGAGCAGTACGAGAAGGAGGGTCGCGGCCGTGAGACC 919670 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 | | ||| |||||||| |||| ||||| | || | ||| | ||||| || | ||| Sbjct 919671 GTCCGCGCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGGTCGAGACCGGTAACCCC 919730 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||| ||||||| ||| |||||||||||| |||||| || |||||||||| | | Sbjct 919731 TTCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACGA-T 919789 Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | |||| |||||| || |||||| | || ||||| || ||||| ||| || || Sbjct 919790 CCGCAGCTCCAACCTTTGCTGCGAGATCGTCGAGTACACTGCCCCCGATGAGGTCGCTGT 919849 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAG------ATGGTACTTTTGA 364337 || ||| | || ||| | || || ||| | || || | | | ||| | || Sbjct 919850 CTGCAACTTGGCCTCGCTGGCTCTCCCGACCTTCGTCGACGTTGAGAACGGTGTCTACGA 919909 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCA-ATCTCG-ACAAGGTTATC 364395 | | || | ||| | || || ||| | |||| | || | | || | ||||| | ||| Sbjct 919910 CTTCAAGAAGCTTCACGAGGTTACCCA-GGTGCT-CGTGAAGAACTTGAACAAGATCATC 919967 Query 364396 GACAAGAATTATTATCCAATTCCTGAAGCC-GAGCGTTCTAATATGCGTCATCGCCCGAT 364454 |||| || | || || | || || ||| || | | || |||||||| ||||| || Sbjct 919968 GACATCAACCACTACCCGGTGCCCGAGGCCAGAAAGAGC-AACATGCGTCACCGCCCCAT 920026 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTC 364514 | | ||||| | || || || || | || || || ||| | || ||||| Sbjct 920027 CGCAGTGGGTGTCAACGGTCTTGCCGATGCCTTCCTGGCTCTTCGCATGCCTTTCGATTC 920086 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 || || || || || | |||| || || || || || ||| | || || Sbjct 920087 CCCCGAGGCCAAGCAGCTCAACATCCAGATTTTCGAGACCATCTACCATGCATCCATCAC 920146 Query 364575 TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG--GTCC--C 364630 ||| ||| |||| | || || | | || ||| || | |||| |||| | Sbjct 920147 TGCCTCGATTGATCTTGCCAAGCTCCATGGTCCCTACGAGACCTTCCAGGGCAGTCCTGC 920206 Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGA---- 364686 |||| ||||| | || |||| || | ||||| || | || | | |||| Sbjct 920207 CTCT----CAGGGCATCTTGCAGTACGACATGTGGAA---CAAGGCA-CCGACCGACCTT 920258 Query 364687 TGGAACTGGGATA-CGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGT 364745 ||| ||||||| | || | | | | || |||| |||| |||||||| || | Sbjct 920259 TGGGACTGGGACAGCGTGAAG-GCTGAGATTGCTCAGCACGGTATCCGCAACTCTCTGCT 920317 Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805 || ||||||||||| || || || ||||||||||| ||||||||| ||||| Sbjct 920318 CGTCGCACCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACGAGTGTTTCGA 920377 Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865 |||| || || | || || ||||| || || | || || |||| ||| || || Sbjct 920378 GCCGTACACGTCGAACATCTACTCTCGCCGTGTGCTGGCTGGCGAGTTTCAGGTCGTCAA 920437 Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA-CAGCATGAAGAACT 364924 | || ||||||| | ||||| ||| |||||| ||| ||| ||||||||| Sbjct 920438 CCCCTGGCTCCTCAAGGACTTGGTCGACCTCGGCCTGTGGTCTGATCAG-ATGAAGAACC 920496 Query 364925 ATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGC 364984 |||||||| | || |||||| | ||| | || || |||| || || | ||| Sbjct 920497 GCATCATCGCTTCCAACGGTTCTATCCAGCAGATCCCCAACATTCCCGACGACATCAAGG 920556 Query 364985 CTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATC 365044 | | ||||| || || ||||| |||| ||| || || | | ||||| ||||||| Sbjct 920557 CGCTCTACAAGACGGTCTGGGAGCTTTCTCAGCGCACCATCGTCCAGATGGCTGCCGATC 920616 Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCG 365104 | ||||| || || ||| ||| ||| | ||| | ||||| | || || | Sbjct 920617 GGGGTGCCTTCATTGACCAGTCCCAATCGCTCAACATCCACATGAAAGACCCTACGATGG 920676 Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| | || || ||||| || || ||||| |||||| ||||| || Sbjct 920677 GCAAGATCACGTCGATGCACTTTGCTGGCTGGAAGCTCGGTCTCAAGACTGG 920728 >seq114 Length=4268993 Score = 93.3 bits (102), Expect = 1e-13 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 65881 GTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACGCTGGATGTAA 65940 ||||||||||| ||| ||| ||||||| ||||| || |||| |||||||||||| Sbjct 3763771 GTTCCGTCATACTTGGCCATGACATCTTCAAGAGCCTTGACCAGACGGCGCTGGATGTAA 3763712 Query 65941 CCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGACATTGCAGAA 66000 ||| | | || || || || |||||||||| |||||| || || || | ||| || Sbjct 3763711 CCAGTCTCGGCGGTCTTGACGGCGGTATCAATGAGACCCTCGCGACCAGCCATGGCGTGG 3763652 Query 66001 AAGAAAAACTCAGTCGGTTGTAGACCAAGCATAAACGAATTTTGAA 66046 ||||| || |||| || |||||| ||| | | || || |||| Sbjct 3763651 AAGAAGAATTCAGAGGGGGTAAGACCACGCAGATAAGAGTTCTGAA 3763606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351679589930