Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq111 89.7 4e-13 seq80 87.8 2e-12 >seq111 Length=3622730 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651 ||| || || || || || || || || || |||||||| || ||||| || | ||| Sbjct 146442 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTCCAT 146501 Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711 || ||||| || || | || | || || | || ||| ||| | | || ||| || Sbjct 146502 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACCAGCAGGCG 146561 Query 104712 ATCCGCCACAAATTCGATGTACTCGCACATAGAATGTG-CATTCATGCCCAGCATTGCGA 104770 ||||| || || |||||||||| |||||| || ||| |||||||||| || | |||| Sbjct 146562 GTCCGCGACGAACTCGATGTACTGGCACAT-GAGCGTGGCATTCATGCCGAGAAGAGCGA 146620 Query 104771 CGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTC 104816 |||| | || | || | || || |||||||| || || || || Sbjct 146621 CGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTC 146666 >seq80 Length=2705162 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| | || |||||| | |||||||||||| | ||||| ||||| || Sbjct 1572531 ATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACGTCAAGAGCAAGATCCAGGAT 1572590 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || |||||||| ||||| ||||| ||| | |||| | || ||||||||| || |||||| Sbjct 1572591 AAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTTGAAGAT 1572650 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 | | | | | | ||| || |||||||| || || || || ||||| Sbjct 1572651 GGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCTTCAT 1572698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935397417825