Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq111 217 1e-51 seq80 136 4e-27 seq115 109 5e-19 seq114 102 8e-17 seq96 98.7 9e-16 >seq111 Length=3622730 Score = 217 bits (240), Expect = 1e-51 Identities = 832/1287 (65%), Gaps = 41/1287 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 |||||||||||||||||||| |||| |||||| || | || | ||| |||||| | || Sbjct 920437 TTGACGACCTGAAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGC 920378 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || ||| ||||||| ||| ||||| ||| ||||| |||||||||||| || || Sbjct 920377 TCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACG 920318 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | ||||||| || || |||| | | |||| ||||| Sbjct 920317 AGCAGAGAGTTGCGGATACCGTGCTGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCAA 920258 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || ||||| | || |||||||||||||||||| ||||||| ||| || ||| Sbjct 920257 AGGTCGGTCGGTGCCTTGTTCCACATGTCGTACTGCAAGATGCCCTGAGAGGCAGGACTG 920198 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAG--TTTTGGCGAGCTCGCAACTCGCCTC-CAGA 145354 || || |||| ||| | ||| | ||||| || || | ||| | || Sbjct 920197 CCCTGGAAGGTCTCGTA--GGGACCATGGAGCTTGGCAAGATC---AATCGAGGCAGTGA 920143 Query 145355 GCGCCGAA--ATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCT 145412 | | | || || |||||| ||| || |||||||| || | || || | | Sbjct 920142 TGGATGCATGGTAGATGGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCGGGGGAAT 920083 Query 145413 CGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGG 145472 || | |||||||| || | || |||||||| || || | | ||||| |||||| Sbjct 920082 CGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGATGG 920023 Query 145473 GCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATATCGATTACGGTCGA 145529 | || || |||||||||| | || || |||| | || || | || ||||| Sbjct 920022 GGCGGTGACGCATGTTGCTCTTTCTGGC---CTCGGGCACCGGGTAGTGGTTGATGTCGA 919966 Query 145530 TAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAA 145589 | || || |||||||| ||| | |||| |||| | | | ||| | ||||| Sbjct 919965 TGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGT 919906 Query 145590 ACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTG 145649 | | | | |||||| | || || | || || | ||| ||||| || || || | Sbjct 919905 AGACACCGTTCTCAACGTCGACGAAGGTCGGGAGAGCCAGCGAGGCCAAGTTGCAGACAG 919846 Query 145650 CCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGG 145709 | ||| |||| | | |||| | ||||||||| ||| | ||| | ||| | Sbjct 919845 CGACCTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGAGCTGCGGATCG 919786 Query 145710 TTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTC 145769 | || || || | || || || || | |||||| |||||||| |||||| | || Sbjct 919785 TACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGT 919726 Query 145770 CGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGC--AAG-TCCTGCGCACGCACCT 145826 || ||||| ||||| | || ||| || || | ||| | ||| || || || Sbjct 919725 TACCGGTCTCGACCTGGG---CCTCGAGAATGGCGTACCAAAGCTTCTGAGCGCGGACGG 919669 Query 145827 GCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGT 145886 || || ||| ||||| | ||||| | | ||| || |||| ||| || || | Sbjct 919668 TCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCAT 919609 Query 145887 AGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGT 145946 | ||| | ||| || || |||| |||||| ||||| || | ||| |||||| | Sbjct 919608 AAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGCT 919549 Query 145947 TGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGC 146006 ||| || | ||| || | ||| || | ||| || ||||| | || |||||| || | Sbjct 919548 CGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGA 919489 Query 146007 AATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACTATAGATGTCCGCGTGCCAC 146065 ||||| || ||| | || | || ||| | ||| ||| ||| |||||||| Sbjct 919488 CTTCCTCCTTGCCGTGGTTCTTGC-GAAGATCAAGGAAACTGAAGACGTCGGCGTGCCAT 919430 Query 146066 GGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGT 146122 || || | |||| ||||| ||| || || |||||||||||||| |||| || Sbjct 919429 GGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTAGCGC 919370 Query 146123 ACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTA-CGCCGTTCGT--- 146178 | ||||||| ||||||| | |||||| | |||| | |||| |||||| || Sbjct 919369 GCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCG-TTGCTAGTGCCGTTGGTGCC 919311 Query 146179 AG-AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGC 146237 || | | || | | || || || | || |||||||| | |||| || || Sbjct 919310 AGCAATGTA----GCTACCAGTGGCACGGATGCGGTGAACATTGAGACCGATGCCTCCAG 919255 Query 146238 CGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC-- 146295 || |||||| || ||||||| ||| || |||||||| ||||| |||||||| Sbjct 919254 CGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATGCTATCCT 919195 Query 146296 GCTTCGAATGCCGAGCAGAAAGCACGA 146322 |||| ||| ||| || ||||| || Sbjct 919194 CCTTC--ATGTCGATGAGGAAGCAAGA 919170 Score = 149 bits (164), Expect = 6e-31 Identities = 334/494 (68%), Gaps = 11/494 (2%) Strand=Plus/Minus Query 46106 CCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGG 46165 |||||||||| || |||||| | || | | |||| ||||| |||| || | | Sbjct 146929 CCGACTGGGCTCTGCGCTGGATCTGCGACAAGAACTCGACCTTCGCATCGCGTCTGATTG 146870 Query 46166 CCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCA 46225 |||| || || ||||| |||| || ||| || ||| ||||||| | ||| Sbjct 146869 CCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCA 146810 Query 46226 A-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284 | || | || | |||||||||| || || || ||||||||| || || || || ||| Sbjct 146809 AGAAGCGCGGTC-TCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAG 146751 Query 46285 GGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACAC-TCGCGTGCACGACAAGCTTG 46342 ||| |||| || |||||||| || || || | | ||| || || | | | ||| Sbjct 146750 GGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCACATCAAGTCGAAGCCCAGC--- 146694 Query 46343 CGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTA 46402 ||||| | || ||| || ||| ||||| || | || ||||||||||| | | Sbjct 146693 --CCCGAGGCTGTTGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGA 146636 Query 46403 CGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGC-ACAGTCAATGTGCGACTACATC 46461 ||| || ||||||| || || || |||||||| || || ||| ||||| | |||||| Sbjct 146635 CGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACGCTCA-TGTGCCAGTACATC 146577 Query 46462 GAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGC 46521 ||||| || |||||||| ||||| ||| ||| | | |||| | | |||| | Sbjct 146576 GAGTTCGTCGCGGACCGCCTGCTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACC 146517 Query 46522 AATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAG 46581 || || || || || ||| | ||||| || || ||||| || || || ||||| ||| Sbjct 146516 AACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAG 146457 Query 46582 CGCGTCGGCGAGTA 46595 || || || || || Sbjct 146456 CGTGTTGGTGACTA 146443 >seq80 Length=2705162 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| |||||| || | ||| | ||||||||||| ||||||||||| || Sbjct 1573233 GCCACCGCGCAGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGA 1573174 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| |||||||| || ||| |||| | ||||||||||||||| || Sbjct 1573173 GAGGGTACGGCCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGG 1573114 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||| | | || | || || | ||||||| Sbjct 1573113 GATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCGAC 1573054 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || || || ||||| || ||||| Sbjct 1573053 TTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 1573006 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| || || | ||||||||||||||| |||||||| || Sbjct 1573460 CCACCACGCAGACGAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAG 1573401 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| |||| | ||||||||| ||||| ||| Sbjct 1573400 AGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGG 1573341 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | || |||| || || | Sbjct 1573340 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACC 1573281 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | || || || || || || || ||||| ||||||||| Sbjct 1573280 TCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCATG 1573233 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | ||| | ||| |||||||| ||||||||||| ||| | Sbjct 1572721 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 1572662 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || ||||||||||| ||| |||| || |||||||| |||||||| Sbjct 1572661 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGAGGA 1572602 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||||| | || | || |||| ||||||| Sbjct 1572601 ATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACC 1572542 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || ||||| Sbjct 1572541 TCAAGGGTGATGGTCTTGCCGGT 1572519 Score = 109 bits (120), Expect = 5e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||| ||| || ||| || ||||| ||||||||||| Sbjct 1572974 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCAAGCTGCTTGCCA 1572915 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || |||||||||||||| ||||| || || ||||| ||| ||| |||| Sbjct 1572914 GCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 1572855 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 | | || | || || | |||||||| || | ||| | ||| || || || Sbjct 1572854 ACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 1572802 >seq115 Length=1808013 Score = 109 bits (120), Expect = 5e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| |||||||| | || | ||| |||||||| || |||||||| || Sbjct 898953 GCCACCACGCAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 899012 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| || Sbjct 899013 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 899072 Query 131127 GATTCCTTCTTTGTC 131141 ||| || || ||||| Sbjct 899073 GATGCCCTCCTTGTC 899087 >seq114 Length=4268993 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| || |||||| ||||| ||||||||||| ||| ||| Sbjct 2016663 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 2016604 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||||| || || || || ||||| ||| || ||||| | | Sbjct 2016603 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 2016544 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| |||| ||| | ||| || || || || || || |||| Sbjct 2016543 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 2016484 Query 131225 A 131225 | Sbjct 2016483 A 2016483 >seq96 Length=137467 Score = 98.7 bits (108), Expect = 9e-16 Identities = 184/269 (68%), Gaps = 10/269 (4%) Strand=Plus/Minus Query 145738 GTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT 145797 |||||| ||||||||||| |||| | || ||||| ||||||| |||| |||| || | Sbjct 7730 GTTGCAGGCGTCCTTGTACAGCACGCTTGGCCCGCCCGTCTCCATCTGCATCTCGACCAC 7671 Query 145798 -----AAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCG 145852 | || |||| ||| | | | ||| || || ||||||| | ||| Sbjct 7670 GGCCGACCACAGTGC----CCTCGCCTTGAGCGTGC-GCCGGCCGCGGCCCGTCCCCTCG 7616 Query 145853 TATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTG 145912 || | | ||||||| | || ||| || ||||||| ||| || |||||||||| | Sbjct 7615 TACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTAGCAGTCGACGAGCCCGGGACACTCG 7556 Query 145913 TTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGC 145972 || |||||||||| ||| |||||| || ||| || ||| |||| || ||| Sbjct 7555 GCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCGACCCGGCGCATGAACAGGTCCGGC 7496 Query 145973 ACCCACAGCGCGTACATCAAGTCGCGCGC 146001 |||||||||||||| || |||||| || Sbjct 7495 ACCCACAGCGCGTAGGCCAGGTCGCGTGC 7467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012121481600