Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq111 123 3e-23 >seq111 Length=3622730 Score = 123 bits (136), Expect = 3e-23 Identities = 293/441 (66%), Gaps = 4/441 (1%) Strand=Plus/Minus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 |||||||||||||| |||||| |||| || || || || | || ||||| | | | Sbjct 919624 TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTC 919565 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || |||| | || || |||||||| ||||||||||||||||| ||||| || Sbjct 919564 CAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 919505 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 || || | | | |||||| || || ||||| |||||| ||||| | Sbjct 919504 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCAAGGAAACTGAAG 919445 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | || | ||||| || || | ||| ||||| | | || || || ||||| || ||| Sbjct 919444 ACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 919385 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | ||| | || ||||| || || || | | ||| ||||| | || ||| Sbjct 919384 TGGTCAACGTAGCGCGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTA 919325 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGAC 63350 || || ||||| || | || ||||| ||| ||||||| || | |||| |||| Sbjct 919324 GTGCCGTTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTG--AGAC 919267 Query 63351 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 63410 | || || || || | || ||||| | ||||| || | || || ||||| || | Sbjct 919266 CGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGT 919207 Query 63411 CTATACTATCATCCATCATGT 63431 | || ||||| ||| |||||| Sbjct 919206 CGATGCTATCCTCCTTCATGT 919186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631089154000