Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq80 167 4e-36 seq111 147 4e-30 seq114 143 5e-29 >seq80 Length=2705162 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || |||| ||||| || | || ||||| || || ||||| || || ||| Sbjct 1573232 CCACCGCGCAGACGCAGTACCAGATGCAAAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 1573173 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || || | || ||||| || || Sbjct 1573172 AGGGTACGGCCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1573113 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| | ||| ||| ||||| ||||| | ||| || ||| Sbjct 1573112 ATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTGTCGATCGTGTCCGATGACTCGACT 1573053 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| || || ||||||||||||||||| || ||||| Sbjct 1573052 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 1573006 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || ||||| ||||||||||| || || ||| Sbjct 1573460 CCACCACGCAGACGAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAG 1573401 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||| || || | |||||| || ||||| ||||| | || || || || || Sbjct 1573400 AGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGG 1573341 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| ||| ||| ||||| ||||| | ||||| || Sbjct 1573340 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACC 1573281 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || ||||| || |||||||||||||| |||||||| Sbjct 1573280 TCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCAT 1573234 Score = 131 bits (144), Expect = 3e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | || | || || |||||||| || || ||||| || ||||| Sbjct 1572721 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 1572662 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| |||||||| || | | || || || || ||| Sbjct 1572661 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGATCCGGAGGA 1572602 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || || ||||| ||||||| ||||||||||| | || || || Sbjct 1572601 ATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACC 1572542 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| || || |||| Sbjct 1572541 TCAAGGGTGATGGTCTTGCCGGTGA 1572517 Score = 120 bits (132), Expect = 6e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || |||||||| || ||||| Sbjct 1573004 CCACCACGGAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1572945 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | | || ||||| || || Sbjct 1572944 AGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 1572885 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | |||||| ||||||||||| | || || || Sbjct 1572884 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 1572825 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACG 68450 || | ||||||||| || || || | || ||||| Sbjct 1572824 TCAAGGGTGATGGTCTTGCCAGTCACTGTGATGACG 1572789 >seq111 Length=3622730 Score = 147 bits (162), Expect = 4e-30 Identities = 315/468 (67%), Gaps = 2/468 (0%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||||||||| ||||||||||| || || || |||||||||||||| |||||| Sbjct 146424 CATGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCT 146483 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||| |||||| |||||||||||| |||||||| |||| | | ||| || || Sbjct 146484 GAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 146543 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | |||||| || ||||||||||||||||||| ||| || | || Sbjct 146544 GAGCGCCACCAGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATT 146603 Query 10115 CATGCCAATCA-TGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 |||||| | | ||| | ||| | || || | ||| ||||| ||| | |||| | Sbjct 146604 CATGCCGAGAAGAGCGAC-GGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAG 146662 Query 10174 CTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACA 10233 | || || ||| |||| || | || || |||| || || | ||| ||| Sbjct 146663 CCTCGATGATGATCCTCTCAACAGCCTCGGGGCTGGGCTTCGACTTGATGTGCGAGAACA 146722 Query 10234 GGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAAC 10293 | || |||| | ||| | |||||| || ||| ||||| ||||||||| || Sbjct 146723 GCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTGGAGAAGG 146782 Query 10294 CCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGA 10353 |||||||||||||| || || || |||||||| |||| | ||| || ||| || Sbjct 146783 TGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGA 146842 Query 10354 ACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 | | | |||||| ||| | |||| | || ||| |||||||| Sbjct 146843 AGAAGATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGG 146890 Score = 89.7 bits (98), Expect = 9e-13 Identities = 155/224 (69%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 31451 GTTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCATGCGCAGCTTGAAGAACACGTCCTG 31510 |||||| | ||||||| || || || ||||||||||| || | ||| | || Sbjct 920108 GTTGAGCTGCTTGGCCTCGGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGC 920049 Query 31511 AAGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTACTAGTCTTCGCCTCGGG 31570 |||||| | |||||||||| | || ||||| | |||||||| || | | |||||||| Sbjct 920048 AAGACCGTTGACACCCACTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGG 919989 Query 31571 AATTGCGTAGGACATGACGTCAATGCTCTTGTCGAGGTTCTTGGCCAGAATCT---TCAC 31627 | | |||| ||| ||| ||| |||||| | |||||| | || | || | || Sbjct 919988 CACCGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAAC 919929 Query 31628 GTGCTTGCGAAGGTCCTCAAAGTCGTAGGCACCGTTCTTGACGT 31671 || | |||| | || ||||||||| ||||||||| |||| Sbjct 919928 ---CTCGTGAAGCTTCTTGAAGTCGTAGACACCGTTCTCAACGT 919888 >seq114 Length=4268993 Score = 143 bits (158), Expect = 5e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| |||||||| || Sbjct 2016661 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2016602 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| |||||||| || ||||| |||||| ||| Sbjct 2016601 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 2016542 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||||||||| || |||||||||||||||||||| Sbjct 2016541 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 2016483 Score = 109 bits (120), Expect = 1e-18 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225772 GTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAG 225831 ||| | |||||| || ||||| || ||| || || || | |||||| ||||| || Sbjct 1514651 GTCGAGGTCGTGCTCGACGTAGACGGTCTTGACCTCGGACTGCTTGGGGAAACCCTCAAG 1514592 Query 225832 CTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAG 225891 ||| | || || ||||| | || ||| ||||||| | |||||||| |||| || Sbjct 1514591 CTGCTCGTTGTTGATGGCACGCATCAAGGTGGTCTTGCCGGAACCGTTGGGGCCGAGCAG 1514532 Query 225892 GCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACC 225951 |||||| | | || ||||| | ||| | || ||| || ||||||||| |||| Sbjct 1514531 ACCGTAACGCTGACCACGCTTCAGACGAAGGTGGGTCTGGTTAAGCAGGATCTTGGCACC 1514472 Query 225952 ATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 ||||| |||||||| ||| | ||| || |||||||||||||| Sbjct 1514471 GTAGGCCAGGGAGAAGGTGCAGTTGCAAAGATCCTCACCCTCCTC 1514427 Score = 93.3 bits (102), Expect = 8e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| |||||| |||||| ||||| || || ||| |||||| Sbjct 1515442 CGCCACTGGATGTACTCCGAGGGGGTGCTGTCCAAGTGGTGGTCGATGTGGGCGAAAGCG 1515383 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| | ||| || || || ||||| || | | ||| |||||| || Sbjct 1515382 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGGTGGTAGACA-TCACCCGAGGTGGG 1515324 Query 225101 TGTG-CCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || ||| || || ||||| |||| ||| |||| |||||| ||||| ||||| ||||| Sbjct 1515323 GATGAGCTCACCAGTCAGGACGTTGACGAGAGTAGACTTGCCGGCACCGTTGGGACCAAT 1515264 Query 225160 CACGCCAATCCGGGA 225174 ||| |||| ||||| Sbjct 1515263 GACGGCAATACGGGA 1515249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621075167800