Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001975905.1_202017-01-31] 115 sequences; 37,268,684 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq111 327 2e-84 seq96 123 5e-23 seq84 98.7 2e-15 >seq111 Length=3622730 Score = 327 bits (362), Expect = 2e-84 Identities = 615/907 (68%), Gaps = 69/907 (8%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||||||||||||| || || |||||| || |||||||||||||| Sbjct 147337 ATCTGGCAGATGTACAAGAAGGCGGAGGCTTCTTTCTGGACTGCTGAGGAGATTGACCTC 147278 Query 42360 GCCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416 |||||||| || |||| | | || || |||| || ||| || Sbjct 147277 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCC 147218 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || |||||||||||||| || || ||||| || || |||||||| | | | Sbjct 147217 CACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCGC 147158 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 |||| ||||| ||| | ||||| ||||||||||||||||||||||| || Sbjct 147157 TTCAGCTCCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATG 147098 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| ||| ||| | || || |||||||||| || ||| Sbjct 147097 GAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGCCCAAG 147038 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGA--------------------CGATG---- 42632 |||| | | |||||||| ||||| || | ||||| Sbjct 147037 CAGCGCACCTACCTGTTCAACGCCATCGACAACAGTATGATAGACCCCACACGATGATAT 146978 Query 42633 -----------------------------CCCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663 ||||||||||||| |||||| |||||||| | Sbjct 146977 GGAGCATGGATCACTAACGTGTCATAGTTCCCTGCATCAAGAGGAAGGCCGACTGGGCTC 146918 Query 42664 TCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 | ||||||| | | | || | | || |||| | | ||| | ||||| ||||| Sbjct 146917 TGCGCTGGATCT-GCGACAAGAACTCGACCTTCGCATCGCGTCTGATTGCCTTCGCCGCC 146859 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGT 42781 |||||||| ||||||||| ||| |||||||||||||||||||||||||| || ||| Sbjct 146858 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 146799 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 || |||||||| ||||||||||| ||||| |||||| | | || ||||| |||| | Sbjct 146798 CTC-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGGCATGCACAC 146740 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGT 42901 |||||||||||||| ||||||||| ||| ||| | |||||| ||| || Sbjct 146739 CGACTTTGCCTGCCTGCTGTTCTCG---CACATCAAGTCGAAGCCCAGCCCCGAGGCTGT 146683 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961 | ||||||| ||||| || || ||||||||||||||||| ||| | ||||||| Sbjct 146682 TGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCC 146623 Query 42962 CGTGTCCCTGGTCGGCATGAA--CCACGACCTCATGTGCAAGTACATCCAGTACGTCGCC 43019 ||| | || |||||||||| ||||| ||||||||| |||||||| ||| |||||| Sbjct 146622 CGTCGCTCTTCTCGGCATGAATGCCACG--CTCATGTGCCAGTACATCGAGTTCGTCGCG 146565 Query 43020 GACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGA 43078 |||| || || ||| | | | || || ||||||| | | ||||||||| Sbjct 146564 GACCGCCTGCTGGTGGC-GCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGA 146506 Query 43079 CTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGA 43138 ||| ||||||||||| ||| | |||||||||||||| ||||||||||| || | || Sbjct 146505 CTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 146446 Query 43139 CTACCAG 43145 ||||||| Sbjct 146445 CTACCAG 146439 Score = 291 bits (322), Expect = 2e-73 Identities = 1090/1692 (64%), Gaps = 63/1692 (4%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||| | || || ||||||||| || | |||||||||||||| |||||||| | Sbjct 920775 TGAACTGAATTGGCGCAGCGGCGGCCTGCGTACGGAGGTAGTACATGCCAGTCTTGAGAC 920716 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | |||| | | |||||| | ||| | ||| |||| | ||||| | Sbjct 920715 CGAGCTTCCAGCCAGCAAAGTGCATCGACGTGATCTTGCCCATCGTA------GGGTCTT 920662 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 | | || |||||| || ||| |||||| | ||||| |||| || || | Sbjct 920661 TCATGTG------GATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCAG 920608 Query 243921 CCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979 |||| || || ||| | |||||| | ||| | |||||||||||| | ||||| | Sbjct 920607 CCATCTGGACGATGGTGCG-CTGAGAAAGCTCCCAGACCGTCTTGTAGAGCGCCTTGATG 920549 Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039 | ||||| | ||| | ||| | || || ||| |||||| || | | Sbjct 920548 TCGTCGGGAATGTTGGGGATCTGCTGGATAGAACCGTTGGAAGCGATGATGCGGTTCTTC 920489 Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCACC 244096 || | ||| ||||||||| | | ||| ||| || || ||| | || || Sbjct 920488 ATCTGATCAGACCACAGGCCGAGGTCGACCAAGTCCTTGA---GGAGCCAGGGGTTGACG 920432 Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 ||||||||||| || | |||||| ||||| ||||| ||| || |||||||| Sbjct 920431 ACCTGAAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGCTCGAAA 920372 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 | ||| || ||| || ||||| || || || |||||||| | || |||||| Sbjct 920371 CACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGA 920312 Query 244217 CTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTC-GTTCCAGTCCCACATGCC 244275 ||| | | |||||| | | | | || || | | || ||||||||| | | | Sbjct 920311 GAGTTGCGGATACCGTGC-TGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCAAAGGTC 920253 Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGG 244335 |||| || || | ||||||||| |||||| | |||| | | || Sbjct 920252 -----GGTCGGTGCCTT----GTTCCACATGTCGTACTGCAAGATGCCCTGAGAGGCAGG 920202 Query 244336 GCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTC--- 244392 ||||||| | ||||| ||||||||| | | ||| ||| || | | || | | Sbjct 920201 ACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCAA---TCGAGGCAGT 920145 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 || || || | ||||||||||||||| ||| |||| | | ||||| | | | Sbjct 920144 GATGGATGCATGGTAGATGGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCGGGGGA 920085 Query 244453 GGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512 ||| || |||| | || |||| | ||||| || || | || || | |||| Sbjct 920084 ATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGAT 920025 Query 244513 GGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572 ||| | ||| ||| ||||| |||| |||||||| ||||| |||| |||||| Sbjct 920024 GGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 919965 Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632 | |||||| | ||| || || || || ||| ||| || |||||||| Sbjct 919964 GATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTA 919905 Query 244633 CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAG 244692 | | || || ||| | || ||| ||| || | ||||| Sbjct 919904 GACACCGTTCTCAACGTCGACG-----------AAGGTCGG-GAGAGCCAGCGAGGCCAA 919857 Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752 ||||||||| || ||||| || | | ||||||| ||| |||||| ||| ||||| Sbjct 919856 GTTGCAGACAGCGACCTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGA 919797 Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812 || ||| || || |||| || || ||| |||| ||||||| |||||||| || Sbjct 919796 GCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAG 919737 Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGC 244872 ||||||||| |||||||||| |||||| |||| | | || ||| || | | ||| Sbjct 919736 CATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAAAGCTTCTGAGC 919677 Query 244873 CTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931 ||| ||| || ||| | ||||| |||||| | ||| || |||||||||| Sbjct 919676 GCGGACGGTCTCACG-GCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACT 919618 Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991 || || | || || | || || |||||| ||||||||||| |||| || Sbjct 919617 CGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGC 919558 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 || | || ||| | | ||||||||| || || |||||||| || | ||| ||||| | Sbjct 919557 CGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGC 919498 Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 | || || ||| ||| |||||| | || || | || ||||||||| Sbjct 919497 GAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCAAGGAAACTGAAGACGTCGG 919438 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171 ||||||| ||||| | ||||| |||| ||| || || ||||||||||| |||||||| | Sbjct 919437 CGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAA 919378 Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTT-AGAGTGGCC 245229 | | | | || | |||| ||| ||| || | || | | |||||| ||| ||| Sbjct 919377 CGTAGCGCGC-AGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTAGT-GCC 919320 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTA 245285 ||||||||| |||||| || || | | || ||| | || |||| || | Sbjct 919319 GTTGGTGCCAGCAATGTAGCTACCAGTGGCAC---GGATGC-GGTGAACATTGAGACCGA 919264 Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345 || || ||| ||||||||| | ||||||| |||||| |||||| || || || | Sbjct 919263 TGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGA 919204 Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405 |||| ||| |||||||| || || ||||| || | || ||| ||||||||| | | | Sbjct 919203 TGCTATCCTCCTTCATGTCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGGGGTTCCAG 919144 Query 245406 AGTTGAACAGAG 245417 ||||||||||| Sbjct 919143 CGTTGAACAGAG 919132 >seq96 Length=137467 Score = 123 bits (136), Expect = 5e-23 Identities = 244/361 (68%), Gaps = 0/361 (0%) Strand=Plus/Minus Query 244786 CTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGAC 244845 |||| ||||||||||||||||||| |||| | ||||| || ||||| | ||| | Sbjct 7736 CTTGACGTTGCAGGCGTCCTTGTACAGCACGCTTGGCCCGCCCGTCTCCATCTGCATCTC 7677 Query 244846 GAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTC 244905 || ||| ||| || |||| ||||||| ||| | || | |||| |||| Sbjct 7676 GACCACGGCCGACCACAGTGCCCTCGCCTTGAGCGTGCGCCGGCCGCGGCCCGTCCCCTC 7617 Query 244906 GTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGA 244965 ||| | ||| || || ||||||||| | || ||| | || ||||| ||| Sbjct 7616 GTACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTAGCAGTCGACGAGCCCGGGACACTC 7557 Query 244966 CGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGG 245025 ||||||||||| || |||| |||||| | | | ||||| ||||||| ||||| || Sbjct 7556 GGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCGACCCGGCGCATGAACAGGTCCGG 7497 Query 245026 GATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCT 245085 | ||| || || | | ||||| | | || | |||| ||| ||| | | | Sbjct 7496 CACCCACAGCGCGTAGGCCAGGTCGCGTGCCCGCAGCTCATCCTTGCCGCCGCTGCGGCC 7437 Query 245086 CAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCC 245145 ||| | | ||||||||||| ||| ||||||| ||||||| |||||| ||||| ||| Sbjct 7436 CAGGTTGAGGAAGTCAAAGACATCGGCGTGCCACGGCTCCAGGTAGACGACGAGGCTGCC 7377 Query 245146 G 245146 | Sbjct 7376 G 7376 >seq84 Length=2904622 Score = 98.7 bits (108), Expect = 2e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 242943 ATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTGCTCAAC 243002 ||| | ||||||||| | ||||| |||||||| |||||||||||| |||||||| | | Sbjct 2215144 ATGCGTTTCCCGGACCGCACCACGCCGATCGGCCAGATGATCAACGCGTACCTGACCGGC 2215203 Query 243003 AAGAGCGATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGATGGGAAGCC 243062 |||||| | ||| || |||||| | || || || ||||| || || || |||||||| Sbjct 2215204 GCGAGCGAGCAGGAAGACCACGTCATCCATCTACTCTTCTCAGCAAATCGTTGGGAAGCT 2215263 Query 243063 GC 243064 || Sbjct 2215264 GC 2215265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337842512400